ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 7.29.1

Subclass Accession number: 5963
Subclass: 7.29.1

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
GO : GO:0005515 (>75 %) GO:0008092 (>75 %)
SCOP : 54235 (>75 %) 54236 (>75 %) 54256 (>75 %)

Number of loops: 3

Average sequence ID (%) : 78.7 +/- -42.2
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 90-135

rho (°): 315-360

Consensus Sequence:	ThGLREXWFFG
(φψ)-conformation:	aalpapaaabb

Pattern:	[G]	[K]	[DQ]	[L]	[F]	[D]	x	[V]	[CV]	[KR]	[T]	[ILV]	[G]	[L]	[R]	[E]	[TV]	[W]	[F]	[F]	[G]	[L]	[Q]	[Y]	x
Conservation:	0.631	0.154	-0.929	-0.324	0.631	0.631	-1.626	-0.324	-0.966	-0.562	0.154	-0.961	0.631	-0.324	0.154	0.154	-1.168	3.020	0.631	0.631	0.631	-0.324	0.154	1.109	-1.810

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ef1_A_26	1ef1	A	26	50	GKQLFDQVVKTIGLREVWFFGLQYQ	HHHHHHHHHHHHT---GGGEEEEEE	aaaaaaaaaaaavbaxaaaxbbbbx
1h4r_A_43	1h4r	A	43	67	GKDLFDLVCRTLGLRETWFFGLQYT	HHHHHHHHHHHHT---GGGEEEEEE	aaaaaaaaaaaavxaxaaabbbbbb
1j19_A_26	1j19	A	26	50	GKQLFDQVVKTVGLREVWFFGLQYV	HHHHHHHHHHHHT---GGGEEEEEE	aaaaaaaaaaaavxaxaaabbbxbx

Clusters included in this Subclass