Information on SUBCLASS 8.2.1 |
Subclass Accession number: 452
Subclass: 8.2.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.3 (>75 %) 2.3 (>75 %) 2.3.1 (>75 %) 2.3.1 (>75 %) 2.3.1.412.7 (>75 %) 2.7.1 (>75 %) GO : GO:0004672 (>75 %) GO:0008415 (>50 %) GO:0008415 (>75 %) GO:0016301 (>75 %) GO:0016746 (>50 %) GO:0016746 (>75 %) GO:0016747 (>50 %) GO:0016747 (>75 %) GO:0016772 (>75 %) GO:0016773 (>75 %) SCOP : 53900 (>50 %) 53900 (>75 %) 53901 (>50 %) 53901 (>75 %) 53902 (>50 %) 53902 (>75 %) 56111 (>75 %) 56112 (>75 %) 88854 (>75 %) |
Number of loops: 11 Average sequence ID (%) : 20.6 +/- 18.4 Average RMSD (Å) : 0.718 +/- 0.447 Consensus geometry
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Consensus Sequence: | XXGhpXXphXhh |
(φψ)-conformation: | aalbpaaapabb |
Pattern: | [afgilpt] | x | [aipv] | [acgitv] | x | [AEKR] | [ADTV] | [film] | [dersy] | [adknr] | [anqt] | [GKN] | [ILVW] | [dekqrsty] | x | [ADEGQS] | [deq] | [ILMV] | x | [gilpvw] | [filv] | [ilv] | [AILPV] |
Conservation: | -1.288 | -0.944 | -0.131 | -0.517 | -1.309 | 0.946 | 0.176 | 0.717 | 0.171 | -0.387 | 0.022 | 2.294 | 1.006 | -0.578 | -1.022 | -0.118 | 0.743 | 1.835 | -0.691 | -1.784 | 0.303 | 0.688 | -0.134 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1afw_A_318 | 1afw | A | 320 | 342 | AYAIPKVLEATGLQVQDIDIFEI | HHHHHHHHHHHT--GGG-SEEEE | aaaaaaaaaaavbbaaaxabbbb |
1bup_A_314 | 1bup | A | 314 | 336 | LDPVEKALRDAKLDKSQIHDIVL | HHHHHHHHHHHT--GGG--EEEE | aaaaaaaaaaalbxaaaxabbbx |
1hnj_A_209 | 1hnj | A | 221 | 243 | AHIVDETLAANNLDRSQLDWLVP | HHHHHHHHHHTT--GGG--EEEE | aaaaaaaaaaalbbaaaxabbbx |
1hnj_A_51 | 1hnj | A | 56 | 78 | FEAATRAIEMAGIEKDQIGLIVV | HHHHHHHHHHHT--GGG--EEEE | aaaaaaaaaaavbxaaaxabbbb |
1hzp_A_209 | 1hzp | A | 221 | 243 | GDVGRRAMDAAGVRPDQIDVFVP | HHHHHHHHHHTT--GGG--EEEE | aaaaaaaaaaavbxaaaxabbbx |
1hzp_A_51 | 1hzp | A | 56 | 78 | TEACRRALSNAGLSAADIDGVIV | HHHHHHHHHHTT--GGG--EEEE | aaaaaaaaaaavbbaaaxabbbb |
1k0w_A_141 | 1k0w | A | 146 | 168 | GNVIVETFEKQGIDAAQMPGVLV | HHHHHHHHHHTT--TTT--EEEE | aaaaaaaaaaalbxaaababbbx |
1m3k_A_27 | 1m3k | A | 32 | 54 | ATVISAVLERAGVAAGEVNEVIL | HHHHHHHHHHHT--GGG--EEEE | aaaaaaaaaaavbxaaaxabbbb |
1m3k_A_292 | 1m3k | A | 293 | 315 | IPASRKALERAGWKIGDLDLVEA | HHHHHHHHHHHT--GGG-SEEEE | aaaaaaaaaaavbxaaaxabbbb |
1o98_A_216 | 1o98 | A | 216 | 238 | PLECIEDSYKHGIYDEFVLPSVI | HHHHHHHHHHTT--GGG---EEE | aaaaaaaaaaavbxaaapxwbbx |
1ub7_A_211 | 1ub7 | A | 223 | 245 | NTATLEAIEKAGLTPEDIRLFVP | HHHHHHHHHHHT--GGG-SEEEE | aaaaaaaaaaavbbaaaxabxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bup_A_314 | 1bup | A | MGMAGNESIUM ION | V - 337 |
1hnj_A_209 | 1hnj | A | MLCMALONYL-COENZYME A | G - 209 |
1hnj_A_209 | 1hnj | A | MLCMALONYL-COENZYME A | N - 210 |
1hnj_A_209 | 1hnj | A | MLCMALONYL-COENZYME A | E - 211 |
1hnj_A_209 | 1hnj | A | MLCMALONYL-COENZYME A | V - 212 |
1hnj_A_209 | 1hnj | A | MLCMALONYL-COENZYME A | F - 213 |
1hnj_A_209 | 1hnj | A | MLCMALONYL-COENZYME A | A - 216 |
1hzp_A_51 | 1hzp | A | GOLGLYCEROL | S - 53 |
1hzp_A_51 | 1hzp | A | GOLGLYCEROL | R - 61 |
1hzp_A_209 | 1hzp | A | DAOLAURIC ACID | G - 209 |
1hzp_A_209 | 1hzp | A | DAOLAURIC ACID | P - 210 |
1hzp_A_209 | 1hzp | A | DAOLAURIC ACID | V - 212 |
1hzp_A_209 | 1hzp | A | DAOLAURIC ACID | F - 213 |
1hzp_A_209 | 1hzp | A | GOLGLYCEROL | D - 222 |
1hzp_A_209 | 1hzp | A | GOLGLYCEROL | R - 225 |
1hzp_A_209 | 1hzp | A | GOLGLYCEROL | R - 226 |
1hzp_A_209 | 1hzp | A | GOLGLYCEROL | D - 229 |
1m3k_A_292 | 1m3k | A | SULSULFATE ANION | K - 298 |
1m3k_A_292 | 1m3k | A | SULSULFATE ANION | E - 301 |
1m3k_A_292 | 1m3k | A | SULSULFATE ANION | R - 302 |
1ub7_A_211 | 1ub7 | A | GOLGLYCEROL | E - 228 |
1ub7_A_211 | 1ub7 | A | GOLGLYCEROL | K - 232 |
1ub7_A_211 | 1ub7 | A | GOLGLYCEROL | R - 241 |
Clusters included in this Subclass |
CLUSTER: HE.10.5 |
CLUSTER: HE.8.2 |
CLUSTER: HE.9.0 |