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Information on SUBCLASS 1.1.35
Subclass Accession number: 4382
Subclass: 1.1.35 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 33.3 +/- 31.9
Average RMSD (Å) : 0.500 +/- 0.271

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: hXhXX
(φψ)-conformation: aapaa
Pattern: [HL]x[QT][FLW][FKR][AGW][D][KLM][AL][CI][AT][AGSV]x[GT]x[FHRY][EFM][HT]
Conservation:0.296-0.6890.2050.387-0.724-0.6673.184-0.347-0.2130.3260.261-1.0300.6620.150-1.323-0.344-0.9040.770
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fs7_A_3761fs7   A388405HAQWRADMAIAGHGSFFHHHHHHHHHHHSSTTHHHHaaaaaaaaaaaxaaaaaa
1gu6_A_3641gu6   A376393HAQWRWDLAIASHGIHMHHHHHHHHHHHSSTTHHHHaaaaaaaaaaaxaaaaaa
1n5u_A_661n5u   A6683LHTLFGDKLCTVATLRETHHHHHHHHHHT-TTHHHHaaaaaaaaaaaxaaaaaa
1qdb_A_3861qdb   A394411HGQFKADMAIAAHGNYFHHHHHHHHHHHHSTTHHHHaaaaaaaaaaabaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fs7_A_3761fs7   A     CACALCIUM ION W - 391
1fs7_A_3761fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 398
1fs7_A_3761fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 399
1fs7_A_3761fs7   A     CACALCIUM ION G - 399
1fs7_A_3761fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 400
1fs7_A_3761fs7   A     CACALCIUM ION H - 400
1fs7_A_3761fs7   A     ACTACETATE ION H - 400
1fs7_A_3761fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 401
1fs7_A_3761fs7   A     CACALCIUM ION G - 401
1fs7_A_3761fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 402
1fs7_A_3761fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 403
1fs7_A_3761fs7   A     CACALCIUM ION F - 403
1fs7_A_3761fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 404
1fs7_A_3761fs7   A     CACALCIUM ION F - 404
1fs7_A_3761fs7   A     ACTACETATE ION F - 404
1fs7_A_3761fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 405
1fs7_A_3761fs7   A     CACALCIUM ION H - 405
1fs7_A_3761fs7   A     ACTACETATE ION H - 405
1gu6_A_3641gu6   A     CACALCIUM ION W - 379
1gu6_A_3641gu6   A     GOLGLYCEROL L - 383
1gu6_A_3641gu6   A     HECHEME C A - 386
1gu6_A_3641gu6   A     HECHEME C S - 387
1gu6_A_3641gu6   A     CACALCIUM ION H - 388
1gu6_A_3641gu6   A     HECHEME C H - 388
1gu6_A_3641gu6   A     CACALCIUM ION G - 389
1gu6_A_3641gu6   A     HECHEME C G - 389
1gu6_A_3641gu6   A     CACALCIUM ION H - 391
1gu6_A_3641gu6   A     HECHEME C H - 391
1gu6_A_3641gu6   A     CACALCIUM ION M - 392
1gu6_A_3641gu6   A     HECHEME C M - 392
1gu6_A_3641gu6   A     CACALCIUM ION H - 393
1gu6_A_3641gu6   A     HECHEME C H - 393
1n5u_A_661n5u   A     MYRMYRISTIC ACID L - 66
1n5u_A_661n5u   A     MYRMYRISTIC ACID F - 70
1qdb_A_3861qdb   A     CACALCIUM ION F - 397
1qdb_A_3861qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 404
1qdb_A_3861qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 405
1qdb_A_3861qdb   A     CACALCIUM ION H - 406
1qdb_A_3861qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 406
1qdb_A_3861qdb   A     CACALCIUM ION G - 407
1qdb_A_3861qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 407
1qdb_A_3861qdb   A     CACALCIUM ION Y - 409
1qdb_A_3861qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 409
1qdb_A_3861qdb   A     CACALCIUM ION F - 410
1qdb_A_3861qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 410
1qdb_A_3861qdb   A     CACALCIUM ION H - 411
1qdb_A_3861qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 411
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gu6_A_3641gu6   A HA4HEC BINDING SITE FOR CHAIN AH - 388
1gu6_A_3641gu6   A HA4HEC BINDING SITE FOR CHAIN AH - 391
1gu6_A_3641gu6   A HA4HEC BINDING SITE FOR CHAIN AM - 392
1gu6_A_3641gu6   A HA4HEC BINDING SITE FOR CHAIN AH - 393

Clusters included in this Subclass
CLUSTER: HH.3.217