Information on SUBCLASS 1.2.3 |
Subclass Accession number: 8825
Subclass: 1.2.3 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 34 Average sequence ID (%) : 14.4 +/- 16.5 Average RMSD (Å) : 0.521 +/- 0.204 Consensus geometry
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Consensus Sequence: | XpXXp |
(φψ)-conformation: | aabaa |
Pattern: | x | x | x | [adeknrst] | x | [dkpqrs] | [aeknqrst] | x | x | x |
Conservation: | -0.681 | -0.174 | -0.529 | 0.419 | 0.090 | 2.586 | 0.243 | -0.598 | -0.584 | -0.774 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a53_*_234 | 1a53 | - | 235 | 244 | SLMRNPEKIK | HHHH-TTHHH | aaaabaaaaa |
1a88_A_139 | 1a88 | A | 148 | 157 | ALAANRAQFY | HHHH-HHHHH | aaaabaaaaa |
1aqu_A_193 | 1aqu | A | 195 | 204 | DMKEDIRREV | HHHH-HHHHH | aaaabaaaaa |
1aup_*_33 | 1aup | - | 35 | 44 | VVDAHPEYEE | HHHH-HHHHH | aaaabaaaaa |
1bol_A_72 | 1bol | A | 76 | 85 | IKSKDSSLYN | HHHH-HHHHH | aaaabaaaaa |
1cvl_*_237 | 1cvl | - | 237 | 246 | ANVTDPSTLA | HHHH-THHHH | aaaabaaaaa |
1dmt_A_484 | 1dmt | A | 484 | 493 | DIVSNDNKLN | HHHH-HHHHH | aaaabaaaaa |
1e39_A_423 | 1e39 | A | 425 | 434 | VRKSLSKIDK | HHHH-THHHH | aaaabaaaaa |
1fs7_A_76 | 1fs7 | A | 76 | 85 | MLKEKPALVV | HHHH-THHHH | aaaabaaaaa |
1fxx_A_327 | 1fxx | A | 336 | 345 | ILRENPQVRE | HHHH-THHHH | aaaabaaaaa |
1h5y_A_107 | 1h5y | A | 108 | 117 | AAVRNPQLVA | HHHH-THHHH | aaaabaaaaa |
1ho8_A_111 | 1ho8 | A | 116 | 125 | FFQEDPKQLE | HHHH-TTHHH | aaaabaaaaa |
1ho8_A_414 | 1ho8 | A | 430 | 439 | VVELLPESID | HHHH-TTHHH | aaaabaaaaa |
1i1n_A_112 | 1i1n | A | 122 | 131 | VRKDDPTLLS | HHHH-THHHH | aaaabaaaaa |
1ift_*_161 | 1ift | - | 177 | 186 | EAARFQYIEG | HHHHBHHHHH | aaaabaaaaa |
1izo_A_247 | 1izo | A | 257 | 266 | ALHEHPKYKE | HHHHSTHHHH | aaaabaaaaa |
1j8f_A_121 | 1j8f | A | 123 | 132 | YFKKHPEPFF | HHHH--HHHH | aaaabaaaaa |
1jln_A_272 | 1jln | A | 277 | 286 | DVVASSHLLQ | HHHHTTTHHH | aaaabaaaaa |
1jqo_A_794 | 1jqo | A | 801 | 810 | AIDKDVRNFQ | HHHH-TTHHH | aaaabaaaaa |
1ka9_F_105 | 1ka9 | F | 106 | 115 | AAVRRPELIR | HHHH-THHHH | aaaabaaaaa |
1kep_A_88 | 1kep | A | 90 | 99 | NSLNDPSPFI | HHHH--HHHH | aaaabaaaaa |
1kew_A_86 | 1kew | A | 88 | 97 | RSITGPAAFI | HHHH-THHHH | aaaabaaaaa |
1lt8_A_48 | 1lt8 | A | 48 | 57 | AAVEHPEAVR | HHHH-HHHHH | aaaabaaaaa |
1og5_A_213 | 1og5 | A | 215 | 224 | VYNNFPALLD | HHHH-TTHHH | aaaabaaaaa |
1orr_A_86 | 1orr | A | 88 | 97 | TSIDNPCMDF | HHHH-HHHHH | aaaabaaaaa |
1q1a_A_69 | 1q1a | A | 71 | 80 | FFQSDPLPFY | HHHH--HHHH | aaaabaaaaa |
1qci_A_160 | 1qci | A | 176 | 185 | EAARFKYIEN | HHHH-HHHHH | aaaabaaaaa |
1qdb_A_75 | 1qdb | A | 75 | 84 | MLAKDPALVI | HHHH-THHHH | aaaabwaaaa |
1qo2_A_103 | 1qo2 | A | 104 | 113 | KVLEDPSFLK | HHHH-TTHHH | aaaabaaaaa |
1t7p_A_545 | 1t7p | A | 555 | 564 | FLENTPAIAA | HHHHSTHHHH | aaaabaaaaa |
1thf_D_104 | 1thf | D | 105 | 114 | AAVENPSLIT | HHHH-THHHH | aaaabaaaaa |
1uek_A_203 | 1uek | A | 206 | 215 | AFRLFPELKE | HHHH-THHHH | aaaabaaaaa |
2mas_A_130 | 2mas | A | 135 | 144 | AARLEPRIVD | HHHH-THHHH | aaaabaaaaa |
3gcb_*_168 | 3gcb | - | 168 | 177 | YSTTASRKWN | HHHHB-HHHH | aaaabaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1cvl_*_237 | 1cvl | * | CACA BINDING SITE. | D - 241 |
1ift_*_161 | 1ift | * | ACTACTIVE SITE RESIDUES OF RICIN A-CHAIN. | E - 177 |
1ift_*_161 | 1ift | * | ACTACTIVE SITE RESIDUES OF RICIN A-CHAIN. | R - 180 |
1og5_A_213 | 1og5 | A | AC3SWF BINDING SITE FOR CHAIN A | N - 217 |
Clusters included in this Subclass |
CLUSTER: HH.1.39 |
CLUSTER: HH.1.47 |
CLUSTER: HH.2.115 |
CLUSTER: HH.2.19 |
CLUSTER: HH.2.84 |
CLUSTER: HH.3.17 |
CLUSTER: HH.3.27 |