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Information on SUBCLASS 1.2.9
Subclass Accession number: 8831
Subclass: 1.2.9 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 20.3 +/- 28.8
Average RMSD (Å) : 0.622 +/- 0.172

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: hXpXX
(φψ)-conformation: aabaa
Pattern: [aefl][agkr]x[AEL][deks][DQST]xx[efhy][aikl]
Conservation:-0.8910.160-0.8110.7790.5132.204-1.116-0.735-0.003-0.099
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bj4_A_3061bj4   A316325LKQAMTLEFKHHHTTSHHHHaaaaaxaaaa
1c3c_A_3891c3c   A391400EYLLEDEEVKHHHHT-HHHHaaaaaxaaaa
1c7g_A_2961c7g   A306315LREAMQYEYIHHHHT-HHHHaaaaaxaaaa
1cmv_A_911cmv   A99108RASEKSELVSHHHHT-HHHHaaaaabaaaa
1j8u_A_3451j8u   A345354AGLLSSFGELHHHHT-HHHHaaaaabaaaa
1kho_A_1141kho   A128137FGDADTPYHAHHHHTSHHHHaaaaaxaaaa
1ltz_A_1991ltz   A199208AGILSSKSESHHHHT-HHHHaaaaabaaaa
1mlw_A_3321mlw   A332341AGLLSSISELHHHHT-HHHHaaaaabaaaa
1toh_*_3911toh   -391400AGLLSSYGELHHHHT-HHHHaaaaabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j8u_A_3451j8u   A     FE2FE (II) ION A - 345
1j8u_A_3451j8u   A     FE2FE (II) ION G - 346
1kho_A_1141kho   A     ZNZINC ION H - 126
1kho_A_1141kho   A     ZNZINC ION Y - 127
1kho_A_1141kho   A     ZNZINC ION G - 129
1kho_A_1141kho   A     ZNZINC ION D - 130
1kho_A_1141kho   A     ZNZINC ION T - 133
1kho_A_1141kho   A     ZNZINC ION Y - 135
1kho_A_1141kho   A     ZNZINC ION H - 136
1ltz_A_1991ltz   A     FEFE (III) ION A - 199
1ltz_A_1991ltz   A     FEFE (III) ION G - 200
1mlw_A_3321mlw   A     FEFE (III) ION A - 332
1mlw_A_3321mlw   A     FEFE (III) ION G - 333
1toh_*_3911toh   *     FEFE (III) ION A - 391
1toh_*_3911toh   *     FEFE (III) ION G - 392

Clusters included in this Subclass
CLUSTER: HH.3.40