Logo
Information on SUBCLASS 1.3.8
Subclass Accession number: 2128
Subclass: 1.3.8 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7.1 (>50 %)  2.7.1.112
SCOP : 47768 (>50 %)  47769 (>50 %)  47773 (>50 %)  
 Number of loops: 7

Average sequence ID (%) : 9.5 +/- 14.5
Average RMSD (Å) : 0.386 +/- 0.135

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 0-45 rho (°): 45-90
Consensus Sequence: XXcXX
(φψ)-conformation: aalaa
Pattern: xx[dkqswy]xx[ADGN][ikl]xx[anrst]
Conservation:0.431-0.915-0.735-0.699-0.4042.0290.915-1.2590.4670.170
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1brt_*_1561brt   -164173FNDFYNLDENHHHHTTHHHHaaaaalaaaa
1dl2_A_2351dl2   A238247LYKNNDLLNTHHHHHTHHHHaaaaalaaaa
1gpc_*_881gpc   -92101YISKNDLYNTHHHHTTHHHHaaaaalaaaa
1l5j_A_1411l5j   A148157QSWADAEWFLHHHHTTHHHHaaaaavaaaa
1lw3_A_5251lw3   A527536QRGKENLPKRHHHHTTHHHHaaaaalaaaa
1tml_*_1651tml   -171180WLQQADISNSHHHHTTHHHHaaaaalaaaa
2bce_*_4392bce   -439448LQYVFGKPFAHHHHTTHHHHaaaaalaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpc_*_881gpc   *     ZNZINC ION P - 88
1gpc_*_881gpc   *     ZNZINC ION V - 89
1gpc_*_881gpc   *     ZNZINC ION C - 90
1gpc_*_881gpc   *     ZNZINC ION Q - 91

Clusters included in this Subclass
CLUSTER: HH.1.56
CLUSTER: HH.3.221