Logo
Information on SUBCLASS 10.5.1
Subclass Accession number: 9221
Subclass: 10.5.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 45.8 +/- 24.8
Average RMSD (Å) : 0.420 +/- 0.192

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXKRcPpTcLpchp
(φψ)-conformation: aapppaaalbpbaa
Pattern: [F][PT][DHS][FLM][iv][HR][ast][fq][K][PR]x[P][DQR][ST]x[LM][DKR][DN][adp][ADST][MRY]x[FW][D][F][FLW]
Conservation:1.5050.288-0.532-0.308-0.8260.720-0.932-1.1731.029-0.312-0.9711.980-0.5750.183-0.2170.194-0.4920.317-1.284-0.852-0.820-1.3681.5971.5051.505-0.159
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4e_A_1551a4e   A156181FPHFIHTQKRNPQTNLRDADMFWDFLHHHHHHHHS--TTT-S--HHHHHHHHaaaaaaaaFbpaaalbxbaaaaaaaa
1dgf_A_1611dgf   A161186FPSFIHSQKRNPQTHLKDPDMVWDFWHHHHHHHHSB-TTT-SB-HHHHHHHHaaaaaaaabxxaaavbxbaaaaaaaa
1e93_A_1401e93   A140165FPDLNHIVKRDPRTNMRNMAYKWDFFHHHHHHHHSB-TTT-SB-HHHHHHHHaaaaaaaaxxxaaavbxbaaaaaaaa
1gwe_A_1461gwe   A146171FTHFIRSQKRLPDSGLRDATMQWDFWHHHHHHHHSB-TTT--B-HHHHHHHHaaaaaaaaFbxaaavbxbaaaaaaaa
1m7s_A_1631m7s   A163188FPDMVHAFKPDPRTNLDNDSRRFDFFHHHHHHHHS--TTTSS--HHHHHHHHaaaaaaaaxppaaavbxbaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a4e_A_1551a4e   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 156
1a4e_A_1551a4e   A     AZIAZIDE ION F - 156
1a4e_A_1551a4e   A     AZIAZIDE ION I - 160
1dgf_A_1611dgf   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 161
1dgf_A_1611dgf   A     ACTACETATE ION Q - 168
1dgf_A_1611dgf   A     ACTACETATE ION V - 182
1dgf_A_1611dgf   A     ACTACETATE ION W - 186
1e93_A_1401e93   A     OMTS-DIOXYMETHIONINE F - 140
1e93_A_1401e93   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 140
1e93_A_1401e93   A     OMTS-DIOXYMETHIONINE L - 143
1e93_A_1401e93   A     OMTS-DIOXYMETHIONINE N - 144
1e93_A_1401e93   A     OMTS-DIOXYMETHIONINE V - 147
1e93_A_1401e93   A     OMTS-DIOXYMETHIONINE K - 148
1gwe_A_1461gwe   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 146
1m7s_A_1631m7s   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 163
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gwe_A_1461gwe   A AC4SO4 BINDING SITE FOR CHAIN AK - 154
1gwe_A_1461gwe   A AC4SO4 BINDING SITE FOR CHAIN AR - 155

Clusters included in this Subclass
CLUSTER: HH.9.12