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Information on SUBCLASS 2.1.13
Subclass Accession number: 2172
Subclass: 2.1.13 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.15 (>75 %)  1.15.1 (>75 %)  1.15.1.1 (>75 %)  
GO : GO:0004784 (>75 %)  GO:0016721 (>75 %)  
SCOP : 54718 (>75 %)  54719 (>75 %)  54720 (>75 %)  
Number of loops: 8

Average sequence ID (%) : 15.4 +/- 18.2
Average RMSD (Å) : 0.613 +/- 0.275

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XhhcXp
(φψ)-conformation: aappaa
Pattern: xxxxx[ay][flmv][DNP][afgikt][DEKQR]x[ILMT]x
Conservation:-0.664-0.517-0.292-0.852-0.5971.0140.3081.993-1.1491.017-0.7161.242-0.786
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dpe_*_2791dpe   -283295QALTYAVNKDAIIHHHHHTS-HHHHHaaaaaaxxaaaaa
1jet_A_2871jet   A291303TALKLALDRDIIVHHHHHHS-HHHHHaaaaaaxxaaaaa
1jv1_A_271jv1   A3446YAELQAMNFEELNHHHHHT--HHHHHaaaaaaxbaaaaa
1mkm_A_631mkm   A6981SFVLRRFNIRDIAHHHHHH--HHHHHaaaaaaxbaaaaa
1rh1_A_3861rh1   A393405VNAWKAFNAEDMGHHHHHH--HHHHHaaaaaapxaaaaa
1uiu_A_2631uiu   A267279EALNYAVNKKSLIHHHHHH--HHHHHaaaaaaxxaaaaa
1v33_A_2601v33   A273285RFSKSYFDGRVTVHHHHTSS-HHHHHaaaaaabxaaaaa
2lig_A_1462lig   A146158MDAYFAQPTQGMQHHHHHHS-HHHHHaaaaaaxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dpe_*_2791dpe   *     CDCADMIUM ION Y - 287
1mkm_A_631mkm   A     FMTFORMIC ACID L - 64
1mkm_A_631mkm   A     FMTFORMIC ACID I - 65
1mkm_A_631mkm   A     FMTFORMIC ACID Y - 67
1mkm_A_631mkm   A     FMTFORMIC ACID G - 68
1mkm_A_631mkm   A     FMTFORMIC ACID S - 69
1mkm_A_631mkm   A     FMTFORMIC ACID L - 72
2lig_A_1462lig   A     PHN1,10-PHENANTHROLINE Y - 176

Clusters included in this Subclass
CLUSTER: HH.2.135
CLUSTER: HH.2.174
CLUSTER: HH.3.191
CLUSTER: HH.3.209