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Information on SUBCLASS 2.1.6
Subclass Accession number: 8888
Subclass: 2.1.6 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 17

Average sequence ID (%) : 11.3 +/- 13.7
Average RMSD (Å) : 0.676 +/- 0.236

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXhpXX
(φψ)-conformation: aappaa
Pattern: x[aekrs]xxxx[filmvy][DNPST][aegpqst]x[adenqt]x
Conservation:-1.2380.543-0.971-0.5360.432-0.5061.3682.163-0.115-0.8120.169-0.498
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b0x_A_9401b0x   A940951LEAVVHMSQDDLHHHHTT--HHHHaaaaaaxbaaaa
1b4u_B_2211b4u   B221232PEELSKMPHIQYHHHHTT--HHHHaaaaaaxxaaaa
1bjt_*_11251bjt   -11431154LENLLKLSAKDIHHHHTS-HHHHHaaaaaaxxaaaa
1dc1_A_801dc1   A8091DKAKKFLTEDDKHHHHTT--HHHHaaaaaaxxaaaa
1dx4_A_3011dx4   A305316MSCMRSVDAKTIHHHHTTS-HHHHaaaaaaxxaaaa
1fmc_A_1951fmc   A195206DALKSVITPEIEHHHHTT--HHHHaaaaaaxbaaaa
1fr2_B_651fr2   B6576PELSKNLNPSNKHHHHTTS-HHHHaaaaaabxaaaa
1fx4_A_10551fx4   A10551066HAAYMSLSGEDRHHHHTTS-HHHHaaaaaaxxaaaa
1h3f_A_1371h3f   A141152VRLTSLMTVAQMHHHHTTS-HHHHaaaaaabbaaaa
1hzd_A_1431hzd   A143154LKERAKMSSSEVHHHHTTS-HHHHaaaaaabxaaaa
1ji2_A_3911ji2   A399410TRARMLYPEQAAHHHHTTS-HHHHaaaaaabxaaaa
1jks_A_2381jks   A238249DEYFSNTSALAKHHHHTTS-HHHHaaaaaaxxaaaa
1kas_*_641kas   -6475RKEQRKMDAFIQHHHHTTS-HHHHaaaaaabxaaaa
1mz8_B_5071mz8   B507518PELSKQFSRNNNHHHHTTS-HHHHaaaaaabxaaaa
1n5m_A_2661n5m   A270281IACLRTRPAQDLHHHHTTS-HHHHaaaaaaxwaaaa
1ogs_A_871ogs   A90101ALNILALSPPAQHHHHTTS-HHHHaaaaaaxxaaaa
1qht_A_3411qht   A341352LWDVSRSSTGNLHHHHTT--HHHHaaaaaaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE K - 81
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE K - 84
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE F - 85
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE L - 86
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE D - 89
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE D - 90
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE K - 91
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE E - 93
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE S - 94
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE N - 97
1fmc_A_1951fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 195
1fmc_A_1951fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 196
1fmc_A_1951fmc   A     CHOGLYCOCHENODEOXYCHOLIC ACID A - 196
1fmc_A_1951fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 197
1fmc_A_1951fmc   A     CHOGLYCOCHENODEOXYCHOLIC ACID L - 197
1fmc_A_1951fmc   A     CHOGLYCOCHENODEOXYCHOLIC ACID K - 198
1fmc_A_1951fmc   A     CHOGLYCOCHENODEOXYCHOLIC ACID S - 199
1fmc_A_1951fmc   A     CHOGLYCOCHENODEOXYCHOLIC ACID V - 200
1fmc_A_1951fmc   A     CHOGLYCOCHENODEOXYCHOLIC ACID M - 209

Clusters included in this Subclass
CLUSTER: HH.3.199
CLUSTER: HH.3.23
CLUSTER: HH.4.23
CLUSTER: HH.5.36
CLUSTER: HH.5.57