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Information on SUBCLASS 2.1.7
Subclass Accession number: 8889
Subclass: 2.1.7 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 9.8 +/- 14.9
Average RMSD (Å) : 0.593 +/- 0.225

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pXhpXp
(φψ)-conformation: aappaa
Pattern: xx[adekrs]x[aglmtv][dknrst][aenps][ADENQS]xxx
Conservation:-1.121-0.2360.536-1.0450.3740.9601.2951.630-0.782-0.772-0.839
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bxs_A_751bxs   A7585PWRTMDASERGHHHHS-HHHHHaaaapxaaaaa
1dcs_*_411dcs   -5464FFEHGSEAEKRHHHH--HHHHHaaaaxxaaaaa
1dfm_A_111dfm   A1121ADEILNPQLWKHHHHS-HHHHHaaaaxxaaaaa
1ei9_A_761ei9   A8292NSFFLNVNSQVHHHHS-HHHHHaaaabpaaaaa
1ekq_A_2411ekq   A251261KLSTVTEQDVQHHHH--HHHHHaaaapbaaaaa
1fg7_A_61fg7   A616ITDLARENVRNHHHHS-HHHHHaaaaxxaaaaa
1h0o_A_1131h0o   A116126HWEALKPDERHHHHHS-HHHHHaaaaxxaaaaa
1h16_A_1441h16   A148158VFDVYTPDILRHHHH--HHHHHaaaapbaaaaa
1jku_A_971jku   A100110TMAGMDPEHSLHHHHS-HHHHHaaaaxxaaaaa
1llf_A_2741llf   A277287CLRSASSDTLLHHHHS-HHHHHaaaaxxaaaaa
1lpp_*_2741lpp   -277287CLRGVSSDTLEHHHHS-HHHHHaaaaxxaaaaa
1nd7_A_8261nd7   A834844FVKETDNEVRMHHHHS-HHHHHaaaaxxaaaaa
1o04_A_751o04   A7585PWRRMDASHRGHHHHS-HHHHHaaaaxpaaaaa
1rdr_*_2371rdr   -237247YDASLSPAWFEHHHH--HHHHHaaaaxxaaaaa
1t7p_A_2031t7p   A206216FWSESLEAVDIHHHHS-HHHHHaaaaxpaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dfm_A_111dfm   A     MSESELENOMETHIONINE E - 25
1dfm_A_111dfm   A     MSESELENOMETHIONINE T - 26
1dfm_A_111dfm   A     CACALCIUM ION T - 26
1dfm_A_111dfm   A     MSESELENOMETHIONINE L - 27
1dfm_A_111dfm   A     CACALCIUM ION L - 27
1dfm_A_111dfm   A     MSESELENOMETHIONINE L - 28
1dfm_A_111dfm   A     CACALCIUM ION L - 28
1h0o_A_1131h0o   A     COCOBALT (II) ION D - 139
1h0o_A_1131h0o   A     COCOBALT (II) ION V - 142
1h16_A_1441h16   A     COACOENZYME A N - 145
1h16_A_1441h16   A     COACOENZYME A Q - 146
1h16_A_1441h16   A     COACOENZYME A V - 148
1h16_A_1441h16   A     COACOENZYME A F - 149
1h16_A_1441h16   A     COACOENZYME A D - 150
1h16_A_1441h16   A     COACOENZYME A V - 151
1h16_A_1441h16   A     COACOENZYME A Y - 152
1h16_A_1441h16   A     COACOENZYME A T - 153
1h16_A_1441h16   A     COACOENZYME A P - 154
1h16_A_1441h16   A     COACOENZYME A L - 157
1h16_A_1441h16   A     COACOENZYME A R - 158
1h16_A_1441h16   A     COACOENZYME A R - 160
1h16_A_1441h16   A     COACOENZYME A K - 161
1h16_A_1441h16   A     MGMAGNESIUM ION K - 161
1lpp_*_2741lpp   *     CACALCIUM ION K - 274
1o04_A_751o04   A     GAIGUANIDINE R - 77
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h16_A_1441h16   A COACOA BINDING SITE FOR CHAIN AN - 145
1h16_A_1441h16   A COACOA BINDING SITE FOR CHAIN AQ - 146
1h16_A_1441h16   A COACOA BINDING SITE FOR CHAIN AF - 149
1h16_A_1441h16   A COACOA BINDING SITE FOR CHAIN AD - 150

Clusters included in this Subclass
CLUSTER: HH.1.30
CLUSTER: HH.2.42