Logo
Information on SUBCLASS 2.1.9
Subclass Accession number: 2168
Subclass: 2.1.9 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 11.6 +/- 13.9
Average RMSD (Å) : 0.717 +/- 0.199

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: pXhphX
(φψ)-conformation: aappaa
Pattern: x[ADEKR]xxxx[ilmt][dprst][afgilmpv]xxx
Conservation:-0.7791.822-0.810-0.9190.063-0.5831.9710.673-0.814-0.4210.027-0.230
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bou_B_2211bou   B221232PEELSKMPHIQYHHHHTT--HHHHaaaaaapxaaaa
1ezv_A_1811ezv   A181192LESLENLVVADLHHHHTT--HHHHaaaaaaxbaaaa
1fmc_A_1951fmc   A195206DALKSVITPEIEHHHHTT--HHHHaaaaaaxbaaaa
1fmk_*_3521fmk   -352363GETGKYLRLPQLHHHHTT--HHHHeaaaaaxbaaaa
1h3f_A_1291h3f   A129140SEWLEGLTFKEVHHHHTT--HHHHaaaaaaxxaaaa
1h3f_A_1371h3f   A141152VRLTSLMTVAQMHHHHTTS-HHHHaaaaaabbaaaa
1h5z_A_1551h5z   A155166KKFRDQLDGRFAHHHHTT--HHHHaaaaaabbaaaa
1ji7_A_591ji7   A5970GKALLLLTKEDFHHHHTT--HHHHaaaaaaxxaaaa
1jks_A_2381jks   A238249DEYFSNTSALAKHHHHTTS-HHHHaaaaaaxxaaaa
1kcm_A_2331kcm   A233244LDKWVDLTMDDIHHHHTT--HHHHaaaaaaxbaaaa
1qwg_A_1391qwg   A139150PDKDKQLTIDDRHHHHTT--HHHHaaaaaaxxaaaa
1vin_*_3441vin   -344355ADPYLKYLPSVIHHHHTTS-HHHHabwaaabxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fmc_A_1951fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 195
1fmc_A_1951fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 196
1fmc_A_1951fmc   A     CHOGLYCOCHENODEOXYCHOLIC ACID A - 196
1fmc_A_1951fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 197
1fmc_A_1951fmc   A     CHOGLYCOCHENODEOXYCHOLIC ACID L - 197
1fmc_A_1951fmc   A     CHOGLYCOCHENODEOXYCHOLIC ACID K - 198
1fmc_A_1951fmc   A     CHOGLYCOCHENODEOXYCHOLIC ACID S - 199
1fmc_A_1951fmc   A     CHOGLYCOCHENODEOXYCHOLIC ACID V - 200
1fmc_A_1951fmc   A     CHOGLYCOCHENODEOXYCHOLIC ACID M - 209
1ji7_A_591ji7   A     MSESELENOMETHIONINE G - 59
1ji7_A_591ji7   A     MSESELENOMETHIONINE A - 61
1ji7_A_591ji7   A     MSESELENOMETHIONINE L - 62
1ji7_A_591ji7   A     MSESELENOMETHIONINE L - 65
1ji7_A_591ji7   A     MSESELENOMETHIONINE R - 73

Clusters included in this Subclass
CLUSTER: HH.3.87
CLUSTER: HH.4.37
CLUSTER: HH.5.21