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Information on SUBCLASS 2.4.11
Subclass Accession number: 4613
Subclass: 2.4.11 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 9.5 +/- 10.3
Average RMSD (Å) : 0.767 +/- 0.208

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XhXppX
(φψ)-conformation: aapbaa
Pattern: x[FL][IM][CIT][GL][AGT][NQS][DTY][PQS][HQ]x[EKN][EKL]x
Conservation:-1.4731.6531.316-0.127-0.218-0.2400.433-0.800-0.1271.664-1.0250.546-0.800-0.800
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fc4_A_801fc4   A8093RFICGTQDSHKELEHHHH---HHHHHHHaaaaabbaaaaaaa
1kgn_A_951kgn   A118131IFMTLASTPQINEAHHHHHS-HHHHHHHaaaaaxxaaaaaaa
3mdd_A_923mdd   A107120PLIIGGNYQQQKKYHHHHH--HHHHHHHaaaaaxbaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fc4_A_801fc4   A     MSESELENOMETHIONINE F - 81
1fc4_A_801fc4   A     AKB2-AMINO-3-KETOBUTYRIC ACID F - 81
1fc4_A_801fc4   A     MSESELENOMETHIONINE I - 82
1fc4_A_801fc4   A     AKB2-AMINO-3-KETOBUTYRIC ACID I - 82
1fc4_A_801fc4   A     MSESELENOMETHIONINE C - 83
1fc4_A_801fc4   A     MSESELENOMETHIONINE G - 84
1fc4_A_801fc4   A     MSESELENOMETHIONINE T - 85
1fc4_A_801fc4   A     MSESELENOMETHIONINE Q - 86
1fc4_A_801fc4   A     MSESELENOMETHIONINE H - 89
1fc4_A_801fc4   A     MSESELENOMETHIONINE L - 96
1fc4_A_801fc4   A     MSESELENOMETHIONINE A - 97
1fc4_A_801fc4   A     MSESELENOMETHIONINE A - 98
1fc4_A_801fc4   A     MSESELENOMETHIONINE F - 99
1fc4_A_801fc4   A     MSESELENOMETHIONINE L - 100
1kgn_A_951kgn   A     FEFE (III) ION I - 104
1kgn_A_951kgn   A     OF3FERRIC ION, 1 WATER COORDINATED I - 104
1kgn_A_951kgn   A     FEFE (III) ION M - 107
1kgn_A_951kgn   A     FEFE (III) ION E - 108
1kgn_A_951kgn   A     OF3FERRIC ION, 1 WATER COORDINATED E - 108
1kgn_A_951kgn   A     FEFE (III) ION H - 111
1kgn_A_951kgn   A     OF3FERRIC ION, 1 WATER COORDINATED H - 111
3mdd_A_923mdd   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 100
3mdd_A_923mdd   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 103

Clusters included in this Subclass
CLUSTER: HH.2.216