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Information on SUBCLASS 3.1.4
Subclass Accession number: 2269
Subclass: 3.1.4 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 10.7 +/- 12.7
Average RMSD (Å) : 0.700 +/- 0.253

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pXcXXXX
(φψ)-conformation: aalbpaa
Pattern: xx[aegkr]x[ADEST][cltw][egkr][iklv][ADEQR]x[GNS]x[DPR]x[PRT][CGLVY][fivy][alt]
Conservation:-0.403-0.217-0.816-0.2980.369-0.436-0.772-0.1910.659-0.7512.665-0.6222.161-0.8800.568-0.7480.188-0.477
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bg6_*_3021bg6   -303320VPLSELGRAVNVPTPLIDHHHHHHHHHTT---HHHHaaaaaaaaaalbxaaaaa
1buc_A_2831buc   A303320VYKAACKKQEGKPFTVDAHHHHHHHHHHT---HHHHaaaaaaaaaavxwaaaaa
1htj_F_3841htj   F384401QAEIDSRLRNSEDARGVLHHHHHHHHHTT---HHHHaaaaaaaaaalbxaaaaa
1kqp_A_1861kqp   A187204RQGRTLLKELGAPERLYLHHHHHHHHHTT--THHHHaaaaaaaaaavxxaaaaa
2pgd_*_3922pgd   -406423RRAISTGVQAGIPMPCFTHHHHHHHHHHT---HHHHaaaaaaaaaavxwaaaaa
3mdd_A_2923mdd   A312329YQRAAWEIDSGRRNTYYAHHHHHHHHHTTS--HHHHaaaaaaaaaavbpaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1buc_A_2831buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 283
1buc_A_2831buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 287
1buc_A_2831buc   A     CAAACETOACETYL-COENZYME A T - 317
1htj_F_3841htj   F     MSESELENOMETHIONINE Q - 384
1htj_F_3841htj   F     MSESELENOMETHIONINE A - 385
1htj_F_3841htj   F     MSESELENOMETHIONINE E - 386
1htj_F_3841htj   F     MSESELENOMETHIONINE I - 387
1htj_F_3841htj   F     MSESELENOMETHIONINE A - 404
1htj_F_3841htj   F     MSESELENOMETHIONINE Q - 405
1htj_F_3841htj   F     MSESELENOMETHIONINE E - 406
1htj_F_3841htj   F     MSESELENOMETHIONINE A - 407
1kqp_A_1861kqp   A     MGMAGNESIUM ION K - 186
1kqp_A_1861kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE K - 186
1kqp_A_1861kqp   A     POPPYROPHOSPHATE 2- K - 186
3mdd_A_2923mdd   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 293
3mdd_A_2923mdd   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 294
3mdd_A_2923mdd   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 348
3mdd_A_2923mdd   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 349
3mdd_A_2923mdd   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 350

Clusters included in this Subclass
CLUSTER: HH.4.78