Information on SUBCLASS 3.2.4 |
Subclass Accession number: 4675
Subclass: 3.2.4 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 14.3 +/- 13.8 Average RMSD (Å) : 0.729 +/- 0.214 Consensus geometry
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Consensus Sequence: | XXchXXp |
(φψ)-conformation: | aagppaa |
Pattern: | [gtv] | [ALV] | x | x | [aglv] | [aftv] | x | [adkt] | [DGK] | [AGKLV] | [dps] | [aekr] | [DEKST] | x | x | x | x | [AILV] | x | [EHNQST] | x |
Conservation: | 0.131 | 1.255 | -0.380 | -0.788 | -0.313 | -0.340 | -0.138 | -0.303 | 2.565 | -1.005 | 0.921 | 0.079 | 1.024 | -0.432 | 0.145 | -1.226 | -0.950 | 1.195 | -0.943 | 0.930 | -1.425 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a26_*_703 | 1a26 | - | 715 | 735 | EVQQAVSDGGSESQILDLSNR | HHHHHHHTT--HHHHHHHHHH | aaaaaaaavxpaaaaaaaaaa |
1e3m_A_772 | 1e3m | A | 772 | 792 | GLAVAALAGVPKEVIKRARQK | HHHHHHHTT--HHHHHHHHHH | aaaaaaaagppaaaaaaaaaa |
1fo3_A_528 | 1fo3 | A | 532 | 552 | TLALGVYHGLPASHMELAQEL | HHHHHHHTT--HHHHHHHHHH | aaaaaaaavxpaaaaaaaaaa |
1hzf_A_1171 | 1hzf | A | 1177 | 1197 | TAYALTLTKAPADLRGVAHNN | HHHHHHHTT--HHHHHHHHHH | aaaaaaaalxpaaaaaaaaaa |
1kq3_A_269 | 1kq3 | A | 277 | 297 | VLASLFLTDKPRKMIEEVYSF | HHHHHHHTT--HHHHHHHHHH | aaaaaaaavxxaaaaaaaaaa |
1moq_*_403 | 1moq | - | 416 | 436 | VAKLSRLKGLDASIEHDIVHG | HHHHHHHTT--HHHHHHHHHH | aaaaaaaavxpaaaaaaaaaa |
1o82_A_9 | 1o82 | A | 14 | 34 | TVLNVVEAGGWVTTIVSILTA | HHHHHHHTT--HHHHHHHHHH | aaaaaaaavxxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e3m_A_772 | 1e3m | A | MSESELENOMETHIONINE | G - 772 |
1e3m_A_772 | 1e3m | A | MSESELENOMETHIONINE | V - 775 |
1e3m_A_772 | 1e3m | A | MSESELENOMETHIONINE | A - 776 |
1e3m_A_772 | 1e3m | A | MSESELENOMETHIONINE | L - 778 |
1e3m_A_772 | 1e3m | A | MSESELENOMETHIONINE | A - 779 |
1e3m_A_772 | 1e3m | A | MSESELENOMETHIONINE | G - 780 |
1e3m_A_772 | 1e3m | A | MSESELENOMETHIONINE | V - 781 |
1fo3_A_528 | 1fo3 | A | CACALCIUM ION | F - 528 |
1hzf_A_1171 | 1hzf | A | MSESELENOMETHIONINE | A - 1171 |
1hzf_A_1171 | 1hzf | A | MSESELENOMETHIONINE | A - 1174 |
1hzf_A_1171 | 1hzf | A | MSESELENOMETHIONINE | A - 1194 |
1hzf_A_1171 | 1hzf | A | MSESELENOMETHIONINE | H - 1195 |
1hzf_A_1171 | 1hzf | A | MSESELENOMETHIONINE | N - 1196 |
1hzf_A_1171 | 1hzf | A | MSESELENOMETHIONINE | N - 1197 |
1kq3_A_269 | 1kq3 | A | ZNZINC ION | H - 269 |
1kq3_A_269 | 1kq3 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | H - 269 |
1kq3_A_269 | 1kq3 | A | ZNZINC ION | V - 273 |
1kq3_A_269 | 1kq3 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | V - 273 |
1moq_*_403 | 1moq | * | GLPGLUCOSAMINE 6-PHOSPHATE | Q - 408 |
Clusters included in this Subclass |
CLUSTER: HH.3.159 |
CLUSTER: HH.4.146 |