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Information on SUBCLASS 3.2.4
Subclass Accession number: 4675
Subclass: 3.2.4 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 14.3 +/- 13.8
Average RMSD (Å) : 0.729 +/- 0.214

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXchXXp
(φψ)-conformation: aagppaa
Pattern: [gtv][ALV]xx[aglv][aftv]x[adkt][DGK][AGKLV][dps][aekr][DEKST]xxxx[AILV]x[EHNQST]x
Conservation:0.1311.255-0.380-0.788-0.313-0.340-0.138-0.3032.565-1.0050.9210.0791.024-0.4320.145-1.226-0.9501.195-0.9430.930-1.425
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a26_*_7031a26   -715735EVQQAVSDGGSESQILDLSNRHHHHHHHTT--HHHHHHHHHHaaaaaaaavxpaaaaaaaaaa
1e3m_A_7721e3m   A772792GLAVAALAGVPKEVIKRARQKHHHHHHHTT--HHHHHHHHHHaaaaaaaagppaaaaaaaaaa
1fo3_A_5281fo3   A532552TLALGVYHGLPASHMELAQELHHHHHHHTT--HHHHHHHHHHaaaaaaaavxpaaaaaaaaaa
1hzf_A_11711hzf   A11771197TAYALTLTKAPADLRGVAHNNHHHHHHHTT--HHHHHHHHHHaaaaaaaalxpaaaaaaaaaa
1kq3_A_2691kq3   A277297VLASLFLTDKPRKMIEEVYSFHHHHHHHTT--HHHHHHHHHHaaaaaaaavxxaaaaaaaaaa
1moq_*_4031moq   -416436VAKLSRLKGLDASIEHDIVHGHHHHHHHTT--HHHHHHHHHHaaaaaaaavxpaaaaaaaaaa
1o82_A_91o82   A1434TVLNVVEAGGWVTTIVSILTAHHHHHHHTT--HHHHHHHHHHaaaaaaaavxxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e3m_A_7721e3m   A     MSESELENOMETHIONINE G - 772
1e3m_A_7721e3m   A     MSESELENOMETHIONINE V - 775
1e3m_A_7721e3m   A     MSESELENOMETHIONINE A - 776
1e3m_A_7721e3m   A     MSESELENOMETHIONINE L - 778
1e3m_A_7721e3m   A     MSESELENOMETHIONINE A - 779
1e3m_A_7721e3m   A     MSESELENOMETHIONINE G - 780
1e3m_A_7721e3m   A     MSESELENOMETHIONINE V - 781
1fo3_A_5281fo3   A     CACALCIUM ION F - 528
1hzf_A_11711hzf   A     MSESELENOMETHIONINE A - 1171
1hzf_A_11711hzf   A     MSESELENOMETHIONINE A - 1174
1hzf_A_11711hzf   A     MSESELENOMETHIONINE A - 1194
1hzf_A_11711hzf   A     MSESELENOMETHIONINE H - 1195
1hzf_A_11711hzf   A     MSESELENOMETHIONINE N - 1196
1hzf_A_11711hzf   A     MSESELENOMETHIONINE N - 1197
1kq3_A_2691kq3   A     ZNZINC ION H - 269
1kq3_A_2691kq3   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL H - 269
1kq3_A_2691kq3   A     ZNZINC ION V - 273
1kq3_A_2691kq3   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL V - 273
1moq_*_4031moq   *     GLPGLUCOSAMINE 6-PHOSPHATE Q - 408

Clusters included in this Subclass
CLUSTER: HH.3.159
CLUSTER: HH.4.146