Information on SUBCLASS 3.20.1 |
Subclass Accession number: 4752
Subclass: 3.20.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 62.4 +/- 13.2 Average RMSD (Å) : 0.225 +/- 0.050 Consensus geometry
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Consensus Sequence: | WYhpGXp |
(φψ)-conformation: | aapbeaa |
Pattern: | [TV] | [AIKV] | x | [FLV] | [L] | [N] | [HKR] | [Q] | [V] | [A] | [DN] | [LW] | [NSV] | [V] | [FL] | [FTY] | [TV] | [K] | [IL] | [H] | [NQ] | [FIY] | [H] | [W] | [NY] | [MV] | [KNRT] | [G] | [HP] | [HNQ] | [F] | [F] | [T] | [L] | [H] | [E] | [K] | [FM] | [DE] | [DE] | [FL] | [Y] | [NST] | [E] | x | [AGS] | [EGT] | [HQY] | [IM] | [D] | [ET] | [ILV] | [A] | [E] | [R] | [ILV] | [L] | [AS] |
Conservation: | -0.731 | -1.543 | -1.046 | -1.070 | 0.122 | 1.091 | -0.746 | 0.607 | 0.122 | 0.122 | -0.035 | -0.066 | -1.376 | 0.122 | -0.653 | -0.861 | -0.713 | 0.607 | -0.344 | 2.060 | -0.385 | -0.612 | 2.060 | 3.513 | -0.530 | -0.498 | -1.179 | 1.091 | -0.443 | -0.646 | 1.091 | 1.091 | 0.607 | 0.122 | 2.060 | 0.607 | 0.607 | -0.385 | -0.014 | -0.014 | -0.645 | 1.576 | -0.789 | 0.607 | -1.363 | -0.895 | -1.480 | -0.531 | -0.498 | 1.091 | -0.752 | -0.545 | 0.122 | 0.607 | 0.607 | -0.497 | 0.122 | -0.557 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ji5_A_5 | 1ji5 | A | 5 | 62 | VIEVLNKQVADWSVLFTKLHNFHWYVKGPQFFTLHEKFEELYTESATHIDEIAERILA | HHHHHHHHHHHHHHHHHHHHHHHHH--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaaaaaxbeaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa |
1jig_A_4 | 1jig | A | 7 | 64 | VVEVLNKQVANWNVLYVKLHNYHWYVTGPHFFTLHEKFEEFYNEAGTYIDELAERILA | HHHHHHHHHHHHHHHHHHHHHHHHH--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaaaaaxbeaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa |
1n1q_A_4 | 1n1q | A | 9 | 66 | VAVLLNRQVANWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLS | HHHHHHHHHHHHHHHHHHHHHHHHH--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaaaaaxbeaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa |
1qgh_A_9 | 1qgh | A | 9 | 66 | TKEFLNHQVANLNVFTVKIHQIHWYMRGHNFFTLHEKMDDLYSEFGEQMDEVAERLLA | HHHHHHHHHHHHHHHHHHHHHHHHH--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaaaaapbeaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1qgh_A_9 | 1qgh | A | ASAIRON-BINDING SITE | H - 31 |
1qgh_A_9 | 1qgh | A | ASAIRON-BINDING SITE | H - 43 |
1qgh_A_9 | 1qgh | A | ASAIRON-BINDING SITE | D - 47 |
1qgh_A_9 | 1qgh | A | ASAIRON-BINDING SITE | D - 58 |
1qgh_A_9 | 1qgh | A | ASAIRON-BINDING SITE | E - 62 |
Clusters included in this Subclass |
CLUSTER: HH.4.120 |