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Information on SUBCLASS 3.4.1
Subclass Accession number: 8995
Subclass: 3.4.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 18

Average sequence ID (%) : 10.2 +/- 12.8
Average RMSD (Å) : 0.706 +/- 0.290

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXXXpXp
(φψ)-conformation: aapapaa
Pattern: [dekpqrst][afgiklmv]xxx[cehqst]x[denqrs][dehkprt]xxx
Conservation:0.237-0.213-1.618-0.699-0.2670.242-0.9521.7861.0441.146-1.0290.323
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c0a_A_2961c0a   A297308DLLKSVEFAVFAHHHTT-S-HHHHaaaaapapaaaa
1djx_A_2481djx   A254265LIERYEPSETAKHHHHH---HHHHaaaaaxaxaaaa
1dqw_A_61dqw   A819ERAATHPSPVAAHHHHH-S-HHHHaaaaapaxaaaa
1f20_A_11061f20   A11111122QFASLATNEKEKHHHTTB--HHHHaaaaaxabaaaa
1fgj_A_2151fgj   A215226TVWATMPQREVAHHHHH-S-HHHHaaaaaxwxaaaa
1hn0_A_3361hn0   A348359RAYVLEKDPTQKHHHHH--SHHHHaaaaaxaxaaaa
1hs6_A_5501hs6   A556567KMATEQGRMKFTHHHHH---HHHHaaaaabaxaaaa
1i1i_P_2221i1i   P227238PVMKKCCVPETRHHHHH---HHHHaaaaapaxaaaa
1j36_A_1481j36   A151162EVISKSRDHEELHHHHH---HHHHaaaaaxabaaaa
1k4t_A_4541k4t   A462473REDWKSKEMKVRHHHTT-SSHHHHaaaaapaxaaaa
1kkh_A_2181kkh   A230241DEALKIKNKEDFHHHHH--SHHHHaaaaapabaaaa
1mhy_B_1481mhy   B168179SVGRDCLSDTIRHHHHH-SSHHHHaaaaaxabaaaa
1oaa_*_2051oaa   -209220LARETSKDPELRHHHHH-S-HHHHaaaaapaxaaaa
1qsa_A_2691qsa   A277288DAIMRSQSTSLIHHHHT---HHHHaaaaaxaxaaaa
1qv9_A_2061qv9   A219230EGCFVEQDKERYHHHHT---HHHHaaaaaxaxaaaa
1r2f_A_1291r2f   A139150LAHYVSDEPLKKHHHHHSS-HHHHaaaaaxabaaaa
1tgo_A_4481tgo   A465476KKMKATIDPIEKHHHHH---HHHHaaaaaxaxaaaa
2oat_A_1822oat   A183194SAISSSTDPTSYHHHTT---HHHHaaaaaxabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c0a_A_2961c0a   A     AMPADENOSINE MONOPHOSPHATE F - 304
1c0a_A_2961c0a   A     AMPADENOSINE MONOPHOSPHATE V - 306
1c0a_A_2961c0a   A     AMPADENOSINE MONOPHOSPHATE F - 307
1fgj_A_2151fgj   A     HECHEME C V - 216
1fgj_A_2151fgj   A     HECHEME C W - 217
1fgj_A_2151fgj   A     HECHEME C M - 220
1fgj_A_2151fgj   A     HECHEME C A - 226
1fgj_A_2151fgj   A     HECHEME C G - 228
1fgj_A_2151fgj   A     HECHEME C C - 229
1hs6_A_5501hs6   A     BES2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID R - 563
1hs6_A_5501hs6   A     BES2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID K - 565
1j36_A_1481j36   A     LPR[N2-[(S)-1-CARBOXY-3-PHENYLPROPYL]-L-LYSYL-L-PROLINE E - 150
1oaa_*_2051oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 205
1oaa_*_2051oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 206
1oaa_*_2051oaa   *     OAAOXALOACETATE ION M - 206
1oaa_*_2051oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 207
1oaa_*_2051oaa   *     OAAOXALOACETATE ION Q - 207
1oaa_*_2051oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 208
1oaa_*_2051oaa   *     OAAOXALOACETATE ION Q - 208
1oaa_*_2051oaa   *     OAAOXALOACETATE ION A - 210
1oaa_*_2051oaa   *     OAAOXALOACETATE ION R - 211
1oaa_*_2051oaa   *     OAAOXALOACETATE ION L - 223
1qv9_A_2061qv9   A     MSESELENOMETHIONINE A - 206
1qv9_A_2061qv9   A     MSESELENOMETHIONINE L - 207
1qv9_A_2061qv9   A     MSESELENOMETHIONINE E - 208
1qv9_A_2061qv9   A     MSESELENOMETHIONINE I - 209
1qv9_A_2061qv9   A     MSESELENOMETHIONINE A - 210
1qv9_A_2061qv9   A     MSESELENOMETHIONINE E - 211
1qv9_A_2061qv9   A     MSESELENOMETHIONINE N - 212
1qv9_A_2061qv9   A     MSESELENOMETHIONINE V - 213
1qv9_A_2061qv9   A     MSESELENOMETHIONINE A - 214
1qv9_A_2061qv9   A     MSESELENOMETHIONINE V - 216
1qv9_A_2061qv9   A     MSESELENOMETHIONINE S - 217
1qv9_A_2061qv9   A     MSESELENOMETHIONINE V - 218
1qv9_A_2061qv9   A     MSESELENOMETHIONINE C - 221
1qv9_A_2061qv9   A     MSESELENOMETHIONINE F - 222
1qv9_A_2061qv9   A     MSESELENOMETHIONINE A - 235
1qv9_A_2061qv9   A     MSESELENOMETHIONINE S - 236
1qv9_A_2061qv9   A     MSESELENOMETHIONINE A - 237
1qv9_A_2061qv9   A     MSESELENOMETHIONINE H - 238
1r2f_A_1291r2f   A     FEFE (III) ION E - 158

Clusters included in this Subclass
CLUSTER: HH.2.65
CLUSTER: HH.3.46
CLUSTER: HH.4.28
CLUSTER: HH.5.73