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Information on SUBCLASS 3.9.2
Subclass Accession number: 4730
Subclass: 3.9.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.3 (>50 %)  2.3.3 (>50 %)  2.3.3.1
GO : GO:0004108 (>50 %)  GO:0016746 (>50 %)  GO:0046912 (>50 %)  
SCOP : 48255 (>50 %)  48256 (>50 %)  48257 (>50 %)  
 Number of loops: 5

Average sequence ID (%) : 8.6 +/- 10.8
Average RMSD (Å) : 0.780 +/- 0.164

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: hXXXXhp
(φψ)-conformation: aabpbaa
Pattern: [aep][ehk][AEL]xxxx[LPV][ENPQ][FGIL]xxx[cetw]
Conservation:-0.6720.9180.184-0.269-0.728-0.800-1.1652.0611.595-0.012-0.509-0.2220.784-1.165
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h5z_A_2961h5z   A298311FHALRQIPQLENVLHHTTS--HHHHHHHaaaabpbaaaaaaa
1h99_A_1501h99   A163176AELNEEMPNIINITHHTTS--HHHHHHHaaaabpbaaaaaaa
1jb0_F_961jb0   F96109EKEIIIDVPLAIKCHHHHS--HHHHHHHaaaabxxaaaaaaa
1o98_A_241o98   A2437AVAQANKPNFDRYWHHHHS--HHHHHHHaaaaxxbaaaaaaa
1q44_A_1091q44   A109122PHLLVPFLEGVYYEHHHHS-BHHHHHHHaaaabxxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h5z_A_2961h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 311
1h5z_A_2961h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 315
1jb0_F_961jb0   F     CL1ALPHA CHLOROPHYLL A K - 97
1jb0_F_961jb0   F     CACALCIUM ION E - 98
1jb0_F_961jb0   F     CL1ALPHA CHLOROPHYLL A E - 98
1jb0_F_961jb0   F     CACALCIUM ION I - 99
1jb0_F_961jb0   F     CL1ALPHA CHLOROPHYLL A I - 99
1jb0_F_961jb0   F     CL1ALPHA CHLOROPHYLL A I - 100
1jb0_F_961jb0   F     CACALCIUM ION I - 101
1jb0_F_961jb0   F     CL1ALPHA CHLOROPHYLL A I - 101
1jb0_F_961jb0   F     CL1ALPHA CHLOROPHYLL A L - 105
1jb0_F_961jb0   F     CL1ALPHA CHLOROPHYLL A A - 106
1jb0_F_961jb0   F     CL1ALPHA CHLOROPHYLL A I - 107
1jb0_F_961jb0   F     CL1ALPHA CHLOROPHYLL A C - 109
1jb0_F_961jb0   F     CACALCIUM ION M - 110
1jb0_F_961jb0   F     CL1ALPHA CHLOROPHYLL A M - 110
1jb0_F_961jb0   F     CL1ALPHA CHLOROPHYLL A L - 111
1q44_A_1091q44   A     MLAMALONIC ACID F - 115
1q44_A_1091q44   A     MLAMALONIC ACID E - 117

Clusters included in this Subclass
CLUSTER: HH.4.158
CLUSTER: HH.5.216