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Information on SUBCLASS 4.1.6
Subclass Accession number: 9036
Subclass: 4.1.6 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 10.7 +/- 10.5
Average RMSD (Å) : 0.567 +/- 0.153

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXcphpXX
(φψ)-conformation: aalabpaa
Pattern: [DEK]x[FMW]x[NQR][FIK]xx[DG][KQ][IV][ST][ADR][ADE][DEG][FLV][AKN]xx[KM][AK][QRS][IL][KMY]x[ACI][LY][GLV]
Conservation:0.575-1.3300.800-0.7700.351-1.330-0.770-1.1061.2161.5661.9161.127-1.106-0.2090.015-0.097-0.658-1.106-0.8820.6600.221-0.0971.463-0.6581.407-0.2090.455-1.442
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hr6_B_3491hr6   B358385KEWKRIKSGKISDAEVNRAKAQLKAALLHHHHHHHTT---HHHHHHHHHHHHHHHHaaaaaaaavabxaaaaaaaaaaaaaaaa
1lc0_A_2491lc0   A255282DIFVQKLLDQVSAEDLAAEKKRIMHCLGHHHHHHHTT-S-HHHHHHHHHHHHHHHHaaaaaaaalabxaaaaaaaaaaaaaaaa
1n45_A_321n45   A3259EFMRNFQKGQVTRDGFKLVMASLYHIYVHHHHHHHTT---HHHHHHHHHHHHHHHHaaaaaaaavaxbaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lc0_A_2491lc0   A     PO4PHOSPHATE ION L - 281
1lc0_A_2491lc0   A     PO4PHOSPHATE ION S - 285
1lc0_A_2491lc0   A     PO4PHOSPHATE ION Q - 288
1lc0_A_2491lc0   A     PO4PHOSPHATE ION K - 289
1n45_A_321n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 34
1n45_A_321n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 35
1n45_A_321n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 38

Clusters included in this Subclass
CLUSTER: HH.4.158