Information on SUBCLASS 4.1.6 |
Subclass Accession number: 9036
Subclass: 4.1.6 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 10.7 +/- 10.5 Average RMSD (Å) : 0.567 +/- 0.153 Consensus geometry
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Consensus Sequence: | XXcphpXX |
(φψ)-conformation: | aalabpaa |
Pattern: | [DEK] | x | [FMW] | x | [NQR] | [FIK] | x | x | [DG] | [KQ] | [IV] | [ST] | [ADR] | [ADE] | [DEG] | [FLV] | [AKN] | x | x | [KM] | [AK] | [QRS] | [IL] | [KMY] | x | [ACI] | [LY] | [GLV] |
Conservation: | 0.575 | -1.330 | 0.800 | -0.770 | 0.351 | -1.330 | -0.770 | -1.106 | 1.216 | 1.566 | 1.916 | 1.127 | -1.106 | -0.209 | 0.015 | -0.097 | -0.658 | -1.106 | -0.882 | 0.660 | 0.221 | -0.097 | 1.463 | -0.658 | 1.407 | -0.209 | 0.455 | -1.442 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hr6_B_349 | 1hr6 | B | 358 | 385 | KEWKRIKSGKISDAEVNRAKAQLKAALL | HHHHHHHTT---HHHHHHHHHHHHHHHH | aaaaaaaavabxaaaaaaaaaaaaaaaa |
1lc0_A_249 | 1lc0 | A | 255 | 282 | DIFVQKLLDQVSAEDLAAEKKRIMHCLG | HHHHHHHTT-S-HHHHHHHHHHHHHHHH | aaaaaaaalabxaaaaaaaaaaaaaaaa |
1n45_A_32 | 1n45 | A | 32 | 59 | EFMRNFQKGQVTRDGFKLVMASLYHIYV | HHHHHHHTT---HHHHHHHHHHHHHHHH | aaaaaaaavaxbaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lc0_A_249 | 1lc0 | A | PO4PHOSPHATE ION | L - 281 |
1lc0_A_249 | 1lc0 | A | PO4PHOSPHATE ION | S - 285 |
1lc0_A_249 | 1lc0 | A | PO4PHOSPHATE ION | Q - 288 |
1lc0_A_249 | 1lc0 | A | PO4PHOSPHATE ION | K - 289 |
1n45_A_32 | 1n45 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 34 |
1n45_A_32 | 1n45 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 35 |
1n45_A_32 | 1n45 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | Q - 38 |
Clusters included in this Subclass |
CLUSTER: HH.4.158 |