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Information on SUBCLASS 4.28.1
Subclass Accession number: 9077
Subclass: 4.28.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 52.6 +/- 3.0
Average RMSD (Å) : 0.233 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: pXhDpppE
(φψ)-conformation: aabpbbaa
Pattern: [N][ADK][DE][ILV][CE][KQT][HMW][IV][D][ST][ST][DE][E][W][I]x[T][R][T]
Conservation:0.906-1.267-0.045-0.481-0.775-0.990-0.944-0.1290.906-0.461-0.4590.0390.4892.9860.073-1.3140.4890.4890.489
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hnj_A_191hnj   A1937NADLEKMVDTSDEWIVTRTHHHHHTTSS--HHHHHHHHaaaaaaabxbbaaaaaaaa
1hzp_A_191hzp   A1937NDEICQHIDSSDEWIYTRTHHHHTTSSS--HHHHHHHHaaaaaaabxbbaaaaaaaa
1mzj_A_281mzj   A2846NKEVCTWIDSTEEWIETRTHHHHTTTSS--HHHHHHHHaaaaaaabxbbaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hnj_A_191hnj   A     PO4PHOSPHATE ION D - 21
1hnj_A_191hnj   A     MLCMALONYL-COENZYME A V - 26
1hnj_A_191hnj   A     MLCMALONYL-COENZYME A D - 27
1hnj_A_191hnj   A     MLCMALONYL-COENZYME A T - 28
1hnj_A_191hnj   A     MLCMALONYL-COENZYME A S - 29
1hnj_A_191hnj   A     MLCMALONYL-COENZYME A W - 32
1hnj_A_191hnj   A     MLCMALONYL-COENZYME A I - 33
1hnj_A_191hnj   A     MLCMALONYL-COENZYME A R - 36
1hnj_A_191hnj   A     MLCMALONYL-COENZYME A T - 37
1hzp_A_191hzp   A     DAOLAURIC ACID W - 32
1hzp_A_191hzp   A     GOLGLYCEROL I - 33
1hzp_A_191hzp   A     GOLGLYCEROL Y - 34
1hzp_A_191hzp   A     GOLGLYCEROL T - 35
1hzp_A_191hzp   A     DAOLAURIC ACID R - 36
1hzp_A_191hzp   A     GOLGLYCEROL R - 36
1hzp_A_191hzp   A     DAOLAURIC ACID T - 37
1hzp_A_191hzp   A     GOLGLYCEROL T - 37
1mzj_A_281mzj   A     COACOENZYME A I - 35
1mzj_A_281mzj   A     COACOENZYME A D - 36
1mzj_A_281mzj   A     COACOENZYME A S - 37
1mzj_A_281mzj   A     COACOENZYME A T - 38
1mzj_A_281mzj   A     COACOENZYME A W - 41
1mzj_A_281mzj   A     COACOENZYME A I - 42
1mzj_A_281mzj   A     COACOENZYME A R - 45
1mzj_A_281mzj   A     COACOENZYME A T - 46

Clusters included in this Subclass
CLUSTER: HH.6.111