Information on SUBCLASS 4.4.2 |
Subclass Accession number: 4784
Subclass: 4.4.2 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 19.2 +/- 19.5 Average RMSD (Å) : 0.730 +/- 0.340 Consensus geometry
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Consensus Sequence: | XXpXXcXX |
(φψ)-conformation: | aalappaa |
Pattern: | x | [ilmvw] | [filvy] | [aens] | [aekqs] | [DEGKNR] | [ekl] | x | [dhn] | [dkp] | x | [afy] | [ILVWY] | x | [AEGNRS] | [CHRSY] |
Conservation: | -1.177 | -0.245 | 0.127 | 0.231 | -0.075 | 0.228 | -0.939 | -0.705 | 2.442 | 0.382 | -1.986 | 0.411 | 1.068 | -0.577 | 0.313 | 0.504 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aa6_*_223 | 1aa6 | - | 233 | 248 | VIIEENLYDKAFVASR | HHHHTT-S-HHHHHHH | aaaaalaxxaaaaaaa |
1dms_*_243 | 1dms | - | 253 | 268 | TLVAEDLYDKDFIANY | HHHHTT-S-HHHHHHH | aaaaalaxxaaaaaaa |
1eu1_A_243 | 1eu1 | A | 253 | 268 | TLYSEDLHDKDFLENC | HHHHTT-S-HHHHHHH | aaaaalaxxaaaaaaa |
1g8k_A_306 | 1g8k | A | 316 | 331 | YVVEQGWIDKPFIEAH | HHHHHT-S-HHHHHHH | aaaaavabbaaaaaaa |
1h0h_A_241 | 1h0h | A | 251 | 266 | YILEKELYFKDYVVNY | HHHHTT-S-HHHHHHH | aaaaalaxxaaaaaaa |
1n3l_A_292 | 1n3l | A | 297 | 312 | KDFAAEVVHPGDLKNS | HHHHTT-S-HHHHHHH | aaaaavabxaaaaaaa |
1qsa_A_138 | 1qsa | A | 145 | 160 | VWRASGKQDPLAYLER | HHHHTT-S-HHHHHHH | aaaaavaxxaaaaaaa |
1thf_D_225 | 1thf | D | 225 | 240 | SVFHFREIDVRELKEY | HHHHTT-S-HHHHHHH | aaaaalabxaaaaaaa |
1tmo_*_249 | 1tmo | - | 259 | 274 | EMISKKLYDDKFIQGY | HHHHTT-S-HHHHHHH | aaaaalaxxaaaaaaa |
2nap_A_225 | 2nap | A | 235 | 250 | VIINEELDNPRFWQRY | HHHHTT-S-HHHHHHH | aaaaalaxbaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.5.41 |