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Information on SUBCLASS 6.3.1
Subclass Accession number: 4942
Subclass: 6.3.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 20.6 +/- 20.0
Average RMSD (Å) : 0.550 +/- 0.165

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pXcppphXXp
(φψ)-conformation: aalbabpbaa
Pattern: xx[fgilmy][agiltv]x[denrst][ilv][ailtv][deknqrsty][adekrs][asv]xxx[aclmt][aeknqrt]x[aegnr][gknr][akrs][dkqrst][hkrt][ilv][adegknqst][aglmptv][deknr][deh][filv]x[fklm][astv]
Conservation:-1.107-1.062-0.767-0.621-0.820-0.2992.1310.405-0.671-0.3421.953-1.167-1.181-0.4460.445-0.195-0.229-0.5690.7640.9980.375-0.0812.173-0.677-1.131-0.2591.2171.650-0.676-0.3110.499
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b67_A_231b67   A3464EEMGEEIASEAVKLAKHAGRKTIKAEDIELAHHHHHHHHHHHHHHHHHTT-SS--HHHHHHHaaaaaaaaaaaaaaaaaavbaxxbaaaaaaa
1fnn_A_2391fnn   A239269ARLAIDILYRSAYAAQQNGRKHIAPEDVRKSHHHHHHHHHHHHHHHHHTT-SS--HHHHHHHaaaaaaaaaaaaaaaaaavxabxbaaaaaaa
1g8p_A_2881g8p   A288318LRGELTLLRSARALAALEGATAVGRDHLKRVHHHHHHHHHHHHHHHHHTT-SB--HHHHHHHaaaaaaaaaaaaaaaaaavxabxbaaaaaaa
1h3o_B_851h3o   B89119DDFIESVVTAACQLARHRKSSTLEVKDVQLHHHHHHHHHHHHHHHHHHTT--S--HHHHHHHaaaaaaaaaaaaaaaaaavbNbxbaaaaaaa
1hq3_E_461hq3   E5686EYLTAEILELAGNAARDNKKTRIIPRHLQLAHHHHHHHHHHHHHHHHTTT-SS--HHHHHHHaaaaaaaaaaaaaaaaaavbabxbaaaaaaa
1in4_A_2161in4   A216246PRIAIRLTKRVRDMLTVVKADRINTDIVLKTHHHHHHHHHHHHHHHHHHT-SSB-HHHHHHHaaaaaaaaggaaaaaaaalbabxbaaaaaaa
1ku5_A_231ku5   A3464EEYAIEIAKKAVEFARHAGRKTVKVEDIKLAHHHHHHHHHHHHHHHHTTT-SS--HHHHHHHaaaaaaaaaaaaaaaaaavbaxxbaaaaaaa
1kx5_B_501kx5   B5989KVFLENVIRDAVTYTEHAKRKTVTAMDVVYAHHHHHHHHHHHHHHHHHTT-SS--HHHHHHHaaaaaaaaaaaaaaaaaavbabxxaaaaaaa
1kx5_C_461kx5   C5686EYLTAEILELAGNAARDNKKTRIIPRHLQLAHHHHHHHHHHHHHHHHHTT-SS--HHHHHHHaaaaaaaaaaaaaaaaaalbabxbaaaaaaa
1lv7_A_3611lv7   A361391GADLANLVNEAALFAARGNKRVVSMVEFEKAHHHHHHHHHHHHHHHHHTT-SSB-HHHHHHHaaaaaaaaaaaaaaaaaalbabxbaaaaaaa
1n1j_A_781n1j   A89119SEFISFITSEASERCHQEKRKTINGEDILFAHHHHHHHHHHHHHHHHHTT-SS--HHHHHHHaaaaaaaaaaaaaaaaaavbabxbaaaaaaa
1n1j_B_641n1j   B74104QIFITELTLRAWIHTEDNKRRTLQRNDIAMAHHHHHHHHHHHHHHHHHTT-SS--HHHHHHHaaaaaaaaaaaaaaaaaalbabxbaaaaaaa
1taf_A_401taf   A5080FRYVTSILDDAKVYANHARKKTIDLDDVRLAHHHHHHHHHHHHHHHHHTT-SS--HHHHHHHaaaaaaaaaaaaaaaaaavbabxbaaaaaaa
1taf_B_261taf   B3767SIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSHHHHHHHHHHHHHHHHHTT-SS--HHHHHHHaaaaaaaaaaaaaaaaaavbabxbaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fnn_A_2391fnn   A     ADPADENOSINE-5'-DIPHOSPHATE A - 239
1fnn_A_2391fnn   A     ADPADENOSINE-5'-DIPHOSPHATE R - 240
1fnn_A_2391fnn   A     ADPADENOSINE-5'-DIPHOSPHATE I - 243
1h3o_B_851h3o   B     MSESELENOMETHIONINE L - 85
1h3o_B_851h3o   B     MSESELENOMETHIONINE Q - 86
1h3o_B_851h3o   B     MSESELENOMETHIONINE I - 87
1h3o_B_851h3o   B     MSESELENOMETHIONINE A - 88
1h3o_B_851h3o   B     MSESELENOMETHIONINE F - 91
1h3o_B_851h3o   B     MSESELENOMETHIONINE Q - 117
1h3o_B_851h3o   B     MSESELENOMETHIONINE L - 120
1h3o_B_851h3o   B     MSESELENOMETHIONINE E - 121
1h3o_B_851h3o   B     MSESELENOMETHIONINE R - 122
1h3o_B_851h3o   B     MSESELENOMETHIONINE Q - 123
1hq3_E_461hq3   E     PO4PHOSPHATE ION R - 77
1in4_A_2161in4   A     ADPADENOSINE-5'-DIPHOSPHATE P - 216
1in4_A_2161in4   A     ADPADENOSINE-5'-DIPHOSPHATE R - 217
1in4_A_2161in4   A     ADPADENOSINE-5'-DIPHOSPHATE I - 220
1ku5_A_231ku5   A     ACTACETATE ION G - 52
1ku5_A_231ku5   A     ACTACETATE ION R - 53
1ku5_A_231ku5   A     ACTACETATE ION K - 54
1ku5_A_231ku5   A     ACTACETATE ION T - 55
1ku5_A_231ku5   A     ACTACETATE ION V - 56
1ku5_A_231ku5   A     ACTACETATE ION K - 57
1ku5_A_231ku5   A     ACTACETATE ION V - 58
1ku5_A_231ku5   A     ACTACETATE ION E - 59
1taf_B_261taf   B     ZNZINC ION D - 27
1taf_B_261taf   B     ZNZINC ION A - 28
1taf_B_261taf   B     ZNZINC ION E - 31
1taf_B_261taf   B     ZNZINC ION L - 32
1taf_B_261taf   B     ZNZINC ION D - 35
1taf_B_261taf   B     ZNZINC ION Q - 45
1taf_B_261taf   B     ZNZINC ION A - 48
1taf_B_261taf   B     ZNZINC ION K - 49
1taf_B_261taf   B     ZNZINC ION S - 60
1taf_B_261taf   B     ZNZINC ION V - 61
1taf_B_261taf   B     ZNZINC ION R - 62
1taf_A_401taf   A     ZNZINC ION A - 67
1taf_A_401taf   A     ZNZINC ION K - 69
1taf_A_401taf   A     ZNZINC ION D - 73
1taf_A_401taf   A     ZNZINC ION L - 74
1taf_A_401taf   A     ZNZINC ION D - 75
1taf_A_401taf   A     ZNZINC ION D - 76
1taf_A_401taf   A     ZNZINC ION V - 77
1taf_A_401taf   A     ZNZINC ION R - 78
1taf_A_401taf   A     ZNZINC ION L - 79
1taf_A_401taf   A     ZNZINC ION T - 81
1taf_A_401taf   A     ZNZINC ION E - 82

Clusters included in this Subclass
CLUSTER: HH.6.20
CLUSTER: HH.7.7