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Information on SUBCLASS 6.4.2
Subclass Accession number: 2489
Subclass: 6.4.2 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 9.3 +/- 12.3
Average RMSD (Å) : 1.250 +/- 0.238

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XhcXpphppp
(φψ)-conformation: aagbabbpaa
Pattern: x[AEP]x[ALV][ADQR]xx[ALV][IKV]x[ACLY][GKN][IKT][ADER]x[AILP][DST][DES][DQS]xxxx[AVY]xxx
Conservation:-1.3360.453-0.3381.227-0.3380.082-1.4360.9730.7460.063-0.3381.220-0.618-0.138-0.038-0.8371.5361.7581.939-0.937-0.637-1.149-1.3360.839-1.2360.209-0.333
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f1e_A_851f1e   A85111RATVRRILKRAGIERASSDAVDLYNKLHHHHHHHHHHTT--B--HHHHHHHHHHaaaaaaaaaaagxabbxaaaaaaaaaa
1gz3_A_4711gz3   A471497FPGVALAVILCNTRHISDSVFLEAAKAHHHHHHHHHHTT-----HHHHHHHHHHaaaaaaaaaaalxabbxaaaaaaaaaa
1nd4_A_2341nd4   A234260GEWADRFLVLYGIAAPDSQRIAFYRLLHHHHHHHHHHHT-SS--HHHHHHHHHHaaaaaaaaaaagbabpxaaaaaaaaaa
1ng6_A_201ng6   A3056KASLQNEAIKLKKDSLTEDEELTVLSRHHHHHHHHHHTTSS---HHHHHHHHHHaaaaaaaaaaalbabbxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f1e_A_851f1e   A     MSESELENOMETHIONINE R - 99
1f1e_A_851f1e   A     MSESELENOMETHIONINE A - 100
1f1e_A_851f1e   A     MSESELENOMETHIONINE S - 101
1f1e_A_851f1e   A     MSESELENOMETHIONINE D - 103
1f1e_A_851f1e   A     MSESELENOMETHIONINE A - 104
1f1e_A_851f1e   A     MSESELENOMETHIONINE Y - 108
1f1e_A_851f1e   A     MSESELENOMETHIONINE L - 111
1f1e_A_851f1e   A     MSESELENOMETHIONINE I - 112
1f1e_A_851f1e   A     MSESELENOMETHIONINE C - 113
1f1e_A_851f1e   A     MSESELENOMETHIONINE A - 115
1f1e_A_851f1e   A     MSESELENOMETHIONINE T - 116
1f1e_A_851f1e   A     MSESELENOMETHIONINE E - 118
1f1e_A_851f1e   A     MSESELENOMETHIONINE L - 119
1nd4_A_2341nd4   A     KANKANAMYCIN A R - 258

Clusters included in this Subclass
CLUSTER: HH.6.114
CLUSTER: HH.8.23