Information on SUBCLASS 1.2.5 |
Subclass Accession number: 1003
Subclass: 1.2.5 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>75 %) SCOP : 53473 (>75 %) 53473 (>75 %) 53474 (>75 %) 53474 (>75 %) |
Number of loops: 14 Average sequence ID (%) : 23.5 +/- 21.7 Average RMSD (Å) : 0.557 +/- 0.128 Consensus geometry
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Consensus Sequence: | GpXph |
(φψ)-conformation: | bbeaa |
Pattern: | [AILVY] | x | [AFILV] | [GIKLMTV] | [AG] | [dehqrst] | [GS] | x | [aegq] | [gilt] | x | x | [ailv] | x | x | [agltv] | [asv] |
Conservation: | 0.610 | -0.520 | 0.881 | -0.544 | 2.709 | -0.589 | 1.515 | -0.642 | -0.144 | -0.584 | -0.988 | -0.886 | 0.238 | -0.361 | -1.010 | -0.349 | 0.663 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8q_*_88 | 1a8q | - | 88 | 104 | VTLVAHSMGGGELARYV | EEEEEETTHHHHHHHHH | xbxbbbeaaaaaaaaaa |
1brt_*_92 | 1brt | - | 92 | 108 | AVLVGFSTGTGEVARYV | EEEEEEGGGHHHHHHHH | xbxbbbeaaaaaaaaaa |
1cvl_*_81 | 1cvl | - | 81 | 97 | VNLIGHSQGGLTSRYVA | EEEEEETTHHHHHHHHH | bbbbbbeaaaaaaaaaa |
1ei9_A_109 | 1ei9 | A | 109 | 125 | YNAMGFSQGGQFLRAVA | EEEEEETTHHHHHHHHH | bxbbbbeaaaaaaaaaa |
1fj2_A_108 | 1fj2 | A | 108 | 124 | IILGGFSQGGALSLYTA | EEEEEETHHHHHHHHHH | bbbbbbeaaaaaaaaaa |
1itz_A_565 | 1itz | A | 565 | 581 | LIVMGTGSELEIAAKAA | EEEEE-GGGHHHHHHHH | bbbbbbeaaaaaaaaaa |
1ivy_A_144 | 1ivy | A | 144 | 160 | LFLTGESYAGIYIPTLA | EEEEEETTHHHHHHHHH | bbbbbbeaaaaaaaaaa |
1l8a_A_724 | 1l8a | A | 726 | 742 | VQLLGSGSILRHVREAA | EEEEE-GGGHHHHHHHH | bbbbbbeaaaaaaaaaa |
1lzl_A_149 | 1lzl | A | 154 | 170 | IAVGGQSAGGGLAAGTV | EEEEEETHHHHHHHHHH | bbbbbbeaaaaaaaaaa |
1moq_*_466 | 1moq | - | 467 | 483 | ALFLGRGDQYPIALEGA | EEEEE-GGGHHHHHHHH | bbbbbbeaaaaaaaaaa |
1nh9_A_28 | 1nh9 | A | 29 | 45 | VIIKARGKAINKAVDVA | EEEEEEGGGHHHHHHHH | bbbbbbeaaaaaaaaaa |
1qj4_A_74 | 1qj4 | A | 74 | 90 | VILVGESCGGLNIAIAA | EEEEEETTHHHHHHHHH | bbxbbxeaaaaaaaaaa |
1qz3_A_144 | 1qz3 | A | 149 | 165 | IAVGGDSAGGNLAAVTS | EEEEEETHHHHHHHHHH | bbbbebeaaaaaaaaaa |
1udv_A_33 | 1udv | A | 34 | 50 | VILKGTGREISKAVDVY | EEEEEETTHHHHHHHHH | bbxbbbeaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ei9_A_109 | 1ei9 | A | NAGN-ACETYL-D-GLUCOSAMINE | Q - 126 |
1ei9_A_109 | 1ei9 | A | NAGN-ACETYL-D-GLUCOSAMINE | R - 127 |
1moq_*_466 | 1moq | * | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | R - 472 |
1moq_*_466 | 1moq | * | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | D - 474 |
1moq_*_466 | 1moq | * | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | Q - 475 |
1moq_*_466 | 1moq | * | MPD2-METHYL-2,4-PENTANEDIOL | Y - 476 |
1moq_*_466 | 1moq | * | MPD2-METHYL-2,4-PENTANEDIOL | L - 480 |
1moq_*_466 | 1moq | * | GLPGLUCOSAMINE 6-PHOSPHATE | L - 484 |
1moq_*_466 | 1moq | * | GLPGLUCOSAMINE 6-PHOSPHATE | K - 485 |
1moq_*_466 | 1moq | * | GLPGLUCOSAMINE 6-PHOSPHATE | E - 488 |
1qj4_A_74 | 1qj4 | A | GOLGLYCEROL | E - 79 |
1qj4_A_74 | 1qj4 | A | GOLGLYCEROL | S - 80 |
1qj4_A_74 | 1qj4 | A | GOLGLYCEROL | C - 81 |
1qj4_A_74 | 1qj4 | A | GOLGLYCEROL | G - 82 |
1qz3_A_144 | 1qz3 | A | HDS1-HEXADECANOSULFONIC ACID | D - 154 |
1qz3_A_144 | 1qz3 | A | HDS1-HEXADECANOSULFONIC ACID | S - 155 |
1qz3_A_144 | 1qz3 | A | HDS1-HEXADECANOSULFONIC ACID | A - 156 |
1qz3_A_144 | 1qz3 | A | HDS1-HEXADECANOSULFONIC ACID | G - 157 |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: EH.1.62 |
CLUSTER: EH.2.52 |
CLUSTER: EH.3.34 |