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Information on SUBCLASS 1.3.6
Subclass Accession number: 101
Subclass: 1.3.6 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0003677 (>75 %)  
Number of loops: 5

Average sequence ID (%) : 12.2 +/- 17.4
Average RMSD (Å) : 0.660 +/- 0.089

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: pXchX
(φψ)-conformation: aagbb
Pattern: [kqr]x[ACL][AEKS][DQTY]x[DGN]xx
Conservation:0.525-1.0950.7180.598-0.352-0.9201.880-0.336-1.018
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gpe_A_2981gpe   A300308LILEYSGIGHHHHHTTEEaaaaaavbe
1iq0_A_1201iq0   A134142RILAYAGREHHHHHTTEEaaaaaagxx
1nh8_A_1601nh8   A160168RTLSQHDLVHHHHHTTEEaaaaaalbb
1pt6_A_2601pt6   A267275QDCEDENIQHHHHHTTEEaaaaaalbx
1tfr_*_401tfr   -5664KKAKTLGYTHHHHHTTEEaaaaaagxa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpe_A_2981gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 301
1nh8_A_1601nh8   A     AMPADENOSINE MONOPHOSPHATE R - 160
1nh8_A_1601nh8   A     AMPADENOSINE MONOPHOSPHATE T - 161
1nh8_A_1601nh8   A     AMPADENOSINE MONOPHOSPHATE L - 162
1pt6_A_2601pt6   A     GOLGLYCEROL A - 280

Clusters included in this Subclass
CLUSTER: HE.2.49