|
|
|
|
|
|
|
| Information on SUBCLASS 2.5.1 |
|
Subclass Accession number: 111
Subclass: 2.5.1 Type: HE alpha-beta DB: ArchDB-KI |
Number of loops: 5 Average sequence ID (%) : 27.5 +/- 7.1 Average RMSD (Å) : 0.72 +/- 0.41 Consensus geometry
|
| Consensus Sequence: | ppGXVh |
| (φψ)-conformation: | aappbb |
| Pattern: | {IPV} | {EKQR} | [AFY] | [LM] | {KNS} | {NS} | [CG] | x | [FV] | [ILV] | [AGIL] | {MV} |
| Conservation: | -1.349 | -0.477 | 0.600 | 1.588 | -1.174 | 0.085 | 0.931 | 0.155 | 0.470 | 1.062 | -1.518 | -0.374 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1ehw_B_61 | 1ehw | B | 65 | 76 | IRYMSSGPVVAM | HHHHTSS-EEEE | aaaaaaexbbxb |
| 1kbl_A_383 | 1kbl | A | 383 | 394 | PAALKAGEVIGS | HHHHHHS-EEEE | aaaaaaxxxaeb |
| 1kkh_A_182 | 1kkh | A | 185 | 196 | EEFLKNCKFLIV | HHHHHT--EEEE | aaaaaaxbbbxb |
| 1nhk_R_60 | 1nhk | R | 64 | 75 | VQFMISGPVVLM | HHHHTSS-EEEE | aaaaaabxbbxb |
| 1nue_A_61 | 1nue | A | 65 | 76 | VKYMNSGPVVAM | HHHHHSS-EEEE | aaaaaabxbbxb |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1nhk_R_60 | 1nhk | R | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | L - 63 |
| 1nhk_R_60 | 1nhk | R | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | M - 67 |
| 1nue_A_61 | 1nue | A | GDPGUANOSINE-5'-DIPHOSPHATE | L - 64 |
| 1nue_A_61 | 1nue | A | GDPGUANOSINE-5'-DIPHOSPHATE | Y - 67 |
| Clusters included in this Subclass |
| CLUSTER: HE.3.12 |
| CLUSTER: HE.4.16 |
| For any comment or web-related incidence, send an email to the webmaster. |
|