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Information on SUBCLASS 2.6.2
Subclass Accession number: 1117
Subclass: 2.6.2 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>75 %)  2.7.4 (>75 %)  2.7.4.62.7.7 (>75 %)  
GO : GO:0000287 (>75 %)  GO:0004550 (>75 %)  GO:0005524 (>75 %)  GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016772 (>75 %)  GO:0016776 (>75 %)  GO:0016779 (>75 %)  GO:0019205 (>75 %)  GO:0030554 (>75 %)  
SCOP : 54861 (>75 %)  54919 (>75 %)  54920 (>75 %)  56671 (>75 %)  56672 (>75 %)  
 Number of loops: 9

Average sequence ID (%) : 25.7 +/- 24.8
Average RMSD (Å) : 0.389 +/- 0.060

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 0-45
Consensus Sequence: DhpXhp
(φψ)-conformation: bbplaa
Pattern: [dk][aflvy][dst]x[fhilwy][desy][alpt]x
Conservation:2.081-0.0630.688-1.208-0.306-0.110-0.395-0.686
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hhs_A_3191hhs   A324331DVSDHDTFEESSHHHHbbxlaaaa
1i2k_A_351i2k   A3542KVSLLSAHEETTHHHHbxxvaaaa
1ih7_A_4071ih7   A411418DLTSLYPSEESSHHHHbxxlaaaa
1jx4_A_31jx4   A714DFDYFYAQEETTHHHHbxxlaaaa
1kfs_A_6991kfs   A705712DYSQIELREETTHHHHbxxlaaaa
1nk4_A_6471nk4   A653660DYSQIELREESSHHHHbxxlaaaa
1rdr_*_2331rdr   -233240DYTGYDASEESSHHHHbbbvaaaa
1sh0_A_2421sh0   A242249DYSRWDSTEESSHHHHbxxlaaaa
1t7p_A_4701t7p   A475482DASGLELREETTHHHHbxxlaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hhs_A_3191hhs   A     MNMANGANESE (II) ION A - 322
1hhs_A_3191hhs   A     MNMANGANESE (II) ION T - 323
1hhs_A_3191hhs   A     MNMANGANESE (II) ION D - 324
1i2k_A_351i2k   A     PLPPYRIDOXAL-5'-PHOSPHATE H - 42
1i2k_A_351i2k   A     PLPPYRIDOXAL-5'-PHOSPHATE R - 45
1jx4_A_31jx4   A     MSESELENOMETHIONINE V - 3
1jx4_A_31jx4   A     CACALCIUM ION V - 3
1jx4_A_31jx4   A     CACALCIUM ION D - 7
1jx4_A_31jx4   A     ADI2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE D - 7
1jx4_A_31jx4   A     MSESELENOMETHIONINE F - 8
1jx4_A_31jx4   A     CACALCIUM ION F - 8
1jx4_A_31jx4   A     ADI2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE F - 8
1jx4_A_31jx4   A     CACALCIUM ION D - 9
1jx4_A_31jx4   A     ADI2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE D - 9
1jx4_A_31jx4   A     CACALCIUM ION Y - 10
1jx4_A_31jx4   A     ADI2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE Y - 10
1jx4_A_31jx4   A     CACALCIUM ION F - 11
1jx4_A_31jx4   A     ADI2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE F - 11
1jx4_A_31jx4   A     MSESELENOMETHIONINE Y - 12
1jx4_A_31jx4   A     CACALCIUM ION Y - 12
1jx4_A_31jx4   A     ADI2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE Y - 12
1jx4_A_31jx4   A     MSESELENOMETHIONINE E - 16
1jx4_A_31jx4   A     CACALCIUM ION E - 16
1kfs_A_6991kfs   A     ZNZINC ION Y - 706
1kfs_A_6991kfs   A     ZNZINC ION Q - 708
1kfs_A_6991kfs   A     ZNZINC ION I - 709
1kfs_A_6991kfs   A     ZNZINC ION E - 710
1nk4_A_6471nk4   A     MGMAGNESIUM ION D - 653
1nk4_A_6471nk4   A     MGMAGNESIUM ION Y - 654
1nk4_A_6471nk4   A     MGMAGNESIUM ION S - 655
1nk4_A_6471nk4   A     MGMAGNESIUM ION Q - 656
1rdr_*_2331rdr   *     CACALCIUM ION D - 233
1rdr_*_2331rdr   *     CACALCIUM ION Y - 234
1t7p_A_4701t7p   A     2DA2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE D - 475
1t7p_A_4701t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE D - 475
1t7p_A_4701t7p   A     MGMAGNESIUM ION D - 475
1t7p_A_4701t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE A - 476
1t7p_A_4701t7p   A     MGMAGNESIUM ION A - 476
1t7p_A_4701t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE S - 477
1t7p_A_4701t7p   A     MGMAGNESIUM ION S - 477
1t7p_A_4701t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE G - 478
1t7p_A_4701t7p   A     MGMAGNESIUM ION G - 478
1t7p_A_4701t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE L - 479
1t7p_A_4701t7p   A     MGMAGNESIUM ION L - 479
1t7p_A_4701t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE E - 480
1t7p_A_4701t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE L - 481
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hhs_A_3191hhs   A CA1THE THREE CONSERVED ACTIVE SITE ASPARTATESD - 324

Clusters included in this Subclass
CLUSTER: EH.3.67