Logo
Information on SUBCLASS 2.1.7
Subclass Accession number: 113
Subclass: 2.1.7 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 9.0 +/- 10.6
Average RMSD (Å) : 0.800 +/- 0.129

Consensus geometry
d (Å): 9 delta (°): 135-180 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXchXh
(φψ)-conformation: aalpbp
Pattern: x[degrst][afgkm][FILT]x[aepq]xx[aegr][adekq]x[DGKN][ACFL][cenrs][ilmv][alv]x[agqs]
Conservation:-0.765-0.742-0.9291.520-0.9270.175-0.785-1.236-0.4900.352-0.3722.1160.828-0.7291.4060.980-0.6710.270
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bgx_T_7641bgx   T765782MVKLFPRLEEMGARMLLQHHHHHHHHHHHT-EEEEEaaaaaaaaaaavbbxabb
1cli_A_1161cli   A123140ISGIAEGCLQSGCSLVGGHHHHHHHHHHHT-EEEEEaaaaaaaaaaavbbxaee
1drk_*_1361drk   -142159GEGFQQAVAAHKFNVLASHHHHHHHHHHHT-EEEEEaaaaaaaaaaalxxxabb
1ewk_A_2351ewk   A241258MDAFKELAAQEGLCIAHSHHHHHHHHHHHT-EEEEEaaaaaaaaaaavxxxabb
1hlw_A_251hlw   A2542VGEIIARYEKKGFVLVGLHHHHHHHHHHHT-EEEEEaaaaaaaaaaagxbxabb
1jx6_A_2101jx6   A217234DTFIHQVNRDNNFELQSAHHHHHHHHHHH--EEEEEaaaaaaaaaaalxbxabb
1r9c_A_151r9c   A1633ERMTRILEGVFDAREVYAHHHHHHHHHHH--EEEEEaaaaaaaaaaalpbxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1drk_*_1361drk   *     RIPRIBOSE(PYRANOSE FORM) A - 137
1drk_*_1361drk   *     RIPRIBOSE(PYRANOSE FORM) A - 138
1drk_*_1361drk   *     RIPRIBOSE(PYRANOSE FORM) R - 141
1ewk_A_2351ewk   A     GLUGLUTAMIC ACID Y - 236
1jx6_A_2101jx6   A     AI23A-METHYL-5,6-DIHYDRO-FURO[2,3-D][1,3,2]DIOXABOROLE-2, 2,6,6A-TETRAOL I - 211
1jx6_A_2101jx6   A     AI23A-METHYL-5,6-DIHYDRO-FURO[2,3-D][1,3,2]DIOXABOROLE-2, 2,6,6A-TETRAOL R - 215

Clusters included in this Subclass
CLUSTER: HE.1.18