Information on SUBCLASS 3.1.2 |
Subclass Accession number: 115
Subclass: 3.1.2 Type: HE alpha-beta DB: ArchDB-KI |
Number of loops: 10 Average sequence ID (%) : 10.1 +/- 0.6 Average RMSD (Å) : 0.89 +/- 0.38 Consensus geometry
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Consensus Sequence: | pXXXXXh |
(φψ)-conformation: | aalpabb |
Pattern: | x | x | x | x | x | x | {ACFGIL} | x | {DEKR} | x | {GN} | x | x | x | {AGIV} | {AFIMVW} | {ACFILV} |
Conservation: | -0.307 | -0.991 | -0.059 | 0.467 | -0.434 | -0.442 | -0.216 | -0.934 | 0.934 | -0.948 | 3.182 | -0.363 | 0.561 | -0.677 | -0.024 | -0.406 | 0.658 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dku_A_178 | 1dku | A | 179 | 195 | TRARKLADRLKAPIAII | HHHHHHHHHTT--EEEE | aaaaaaaaaalbxbbbx |
1dku_A_68 | 1dku | A | 76 | 92 | LIMVDALKRASAKTINI | HHHHHHHHHTT-SEEEE | aaaaaaaaaavpabbbx |
1e0t_A_172 | 1e0t | A | 175 | 191 | KQDLIFGCEQGVDFVAA | HHHHHHHHHHT-SEEEE | aaaaaaaaaavxabbxx |
1e0t_A_292 | 1e0t | A | 295 | 311 | AGDVANAILDGTDAVML | HHHHHHHHHHT-SEEEE | aaaaaaaaaagpabbxb |
1e19_A_274 | 1e19 | A | 278 | 294 | VLAAIRFIEWGGERAII | HHHHHHHHHHT-SEEEE | aaaaaaaaaagxabbbb |
1gc5_A_78 | 1gc5 | A | 82 | 98 | LGGILRSIKLGKAMEWF | HHHHHHHHHS---EEEE | aaaaaaaaaalbxbbbx |
1h72_C_63 | 1h72 | C | 66 | 82 | IVAKKMIDDFNIGKGVK | HHHHHHHHHTT---EEE | aaaaaaaaaalxabbbb |
1i58_B_365 | 1i58 | B | 367 | 383 | RMVRDLAKKMNKEVNFI | HHHHHHHHHTT--EEEE | aaaaaaaaaalbbbbxb |
1kbl_A_838 | 1kbl | A | 838 | 854 | PSSVEFCHKVGLNYVSC | HHHHHHHHHTT-SEEEE | aaaaaaaaaavxabbbb |
1pfk_A_198 | 1pfk | A | 202 | 218 | VNEIKAGIAKGKKHAIV | HHHHHHHHHTT-S-EEE | aaaaaaaaaavxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e19_A_274 | 1e19 | A | ADPADENOSINE-5'-DIPHOSPHATE | M - 274 |
1e19_A_274 | 1e19 | A | ADPADENOSINE-5'-DIPHOSPHATE | G - 275 |
1e19_A_274 | 1e19 | A | ADPADENOSINE-5'-DIPHOSPHATE | K - 277 |
1e19_A_274 | 1e19 | A | MGMAGNESIUM ION | K - 277 |
1pfk_A_198 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | K - 211 |
1pfk_A_198 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | G - 212 |
1pfk_A_198 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | K - 213 |
1pfk_A_198 | 1pfk | A | MGMAGNESIUM ION | K - 213 |
1pfk_A_198 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | K - 214 |
1pfk_A_198 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | H - 215 |
1pfk_A_198 | 1pfk | A | MGMAGNESIUM ION | H - 215 |
1pfk_A_198 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | A - 216 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h72_C_63 | 1h72 | C | TRSTRS BINDING SITE FOR CHAIN C | D - 73 |
1h72_C_63 | 1h72 | C | TRSTRS BINDING SITE FOR CHAIN C | N - 76 |
Bibliographic annotations |
Clusters included in this Subclass |
CLUSTER: HE.4.14 |