Logo
Information on SUBCLASS 2.1.10
Subclass Accession number: 116
Subclass: 2.1.10 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 4.4 (>50 %)  4.4.1 (>50 %)  4.4.1.14
GO : GO:0004512 (>75 %)  GO:0016846 (>50 %)  GO:0016847 (>50 %)  GO:0016853 (>75 %)  GO:0016872 (>75 %)  
SCOP : 53382 (>50 %)  53383 (>50 %)  53417 (>50 %)  55346 (>75 %)  55347 (>75 %)  55368 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 9.6 +/- 13.0
Average RMSD (Å) : 0.525 +/- 0.189

Consensus geometry
d (Å): 7 delta (°): 135-180 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXXhpX
(φψ)-conformation: aalpbp
Pattern: [TV][ALV][AES][AKQS][FKL][FLY]x[ADN]x[AGN][IVY][KQTY]xx[AGRS]xx[NPQS][GLVY]
Conservation:1.9850.5430.6390.103-0.0781.220-0.5850.613-1.3590.9561.391-0.585-1.3590.214-0.327-1.187-0.585-0.069-1.531
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e42_A_8611e42   A863881TVSSKLQNNNVYTIAKRNVHHHHHHHTTT-EEEEEEEEaaaaaaaaalbxxabbbxb
1ghe_A_1361ghe   A136154VAEAFYSALAYTRVGELPGHHHHHHHHTT-EEEEEEEEaaaaaaaaavxxxaebbxl
1gr0_A_2041gr0   A210228VLAKLFEDRGVQLDRTMQLHHHHHHHHTT-EEEEEEEEaaaaaaaaavbxxabbbbb
1p1j_A_3251p1j   A331349VLAQFLVDAGIKPVSIASYHHHHHHHHTT-EEEEEEEEaaaaaaaaavxbwabbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e42_A_8611e42   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED L - 868
1e42_A_8611e42   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED Q - 869
1e42_A_8611e42   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED N - 870
1e42_A_8611e42   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED N - 871
1e42_A_8611e42   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED N - 872
1e42_A_8611e42   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED Y - 874
1e42_A_8611e42   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE I - 876
1e42_A_8611e42   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE A - 877
1e42_A_8611e42   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE R - 879
1ghe_A_1361ghe   A     ACOACETYL COENZYME *A V - 136
1ghe_A_1361ghe   A     ACOACETYL COENZYME *A A - 137
1ghe_A_1361ghe   A     ACOACETYL COENZYME *A A - 139
1ghe_A_1361ghe   A     MSESELENOMETHIONINE F - 140
1ghe_A_1361ghe   A     ACOACETYL COENZYME *A F - 140
1ghe_A_1361ghe   A     MSESELENOMETHIONINE Y - 141
1ghe_A_1361ghe   A     ACOACETYL COENZYME *A Y - 141
1ghe_A_1361ghe   A     ACOACETYL COENZYME *A A - 143
1ghe_A_1361ghe   A     MSESELENOMETHIONINE L - 144
1ghe_A_1361ghe   A     ACOACETYL COENZYME *A L - 144
1ghe_A_1361ghe   A     MSESELENOMETHIONINE Y - 146
1ghe_A_1361ghe   A     MSESELENOMETHIONINE A - 157
1p1j_A_3251p1j   A     PO4PHOSPHATE ION Q - 325
1p1j_A_3251p1j   A     CRYPROPANE-1,2,3-TRIOL Q - 325
1p1j_A_3251p1j   A     PO4PHOSPHATE ION T - 326
1p1j_A_3251p1j   A     PO4PHOSPHATE ION K - 327
1p1j_A_3251p1j   A     PO4PHOSPHATE ION N - 350
1p1j_A_3251p1j   A     CRYPROPANE-1,2,3-TRIOL N - 350
1p1j_A_3251p1j   A     CRYPROPANE-1,2,3-TRIOL L - 352
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e42_A_8611e42   A AC1MO5 BINDING SITE FOR CHAIN A SYMMETRY RELATED SUBUNITS CONTRIBUTE TO THE BINDING SITEQ - 869
1e42_A_8611e42   A AC1MO5 BINDING SITE FOR CHAIN A SYMMETRY RELATED SUBUNITS CONTRIBUTE TO THE BINDING SITEN - 870
1e42_A_8611e42   A AC1MO5 BINDING SITE FOR CHAIN A SYMMETRY RELATED SUBUNITS CONTRIBUTE TO THE BINDING SITEN - 872
1e42_A_8611e42   A AC1MO5 BINDING SITE FOR CHAIN A SYMMETRY RELATED SUBUNITS CONTRIBUTE TO THE BINDING SITEY - 874

Clusters included in this Subclass
CLUSTER: HE.4.140