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Information on SUBCLASS 3.5.1
Subclass Accession number: 1162
Subclass: 3.5.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 8.6 +/- 11.3
Average RMSD (Å) : 0.833 +/- 0.180

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 45-90 rho (°): 270-315
Consensus Sequence: XhhhXXX
(φψ)-conformation: bbpbpaa
Pattern: x[filmpvy][afilpvwy][adpstv][dnpst]xxxx
Conservation:-0.060-0.049-0.7180.9882.210-0.679-0.233-0.865-0.596
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d8i_A_2751d8i   A275283IIPDDDLTKEE---HHHHbbpxxaaaa
1dl2_A_5291dl2   A530538FPVLDEEILEE---HHHHbxxxxaaaa
1dto_A_571dto   A5765QVVPTLAVSEE---HHHHbxxxpaaaa
1dys_A_101dys   A1018TLLVNSDYSEE---HHHHbxxxxaaaa
1ec7_A_3091ec7   A309317IPLADPHFWEEB--HHHHbxxbxaaaa
1fjs_A_1561fjs   A160168VPYVDRNSCEEB--HHHHbxxbpaaaa
1gs5_A_651gs5   A6573LRVTPADQIEE-B-HHHHbxpbxaaaa
1gsi_A_1351gsi   A138146LLAVSAELAEE---HHHHxxxbxaaaa
1gvn_B_1381gvn   B143151VMAVPKINSEE---HHHHbxbbpaaaa
1iex_A_2221iex   A222230NTIINREGLEE---HHHHbbxbxaaaa
1m6i_A_2621m6i   A263271TPRSLSAIDEE---HHHHbpxbxaaaa
1oc7_A_981oc7   A98106QLWANNYYREE---HHHHxbxxxaaaa
1qwr_A_951qwr   A96104KVHPDDYYAEE---HHHHbbbxxaaaa
1ri5_A_2231ri5   A225233EYFVDFTRMEE---HHHHbbxxxaaaa
1rsy_*_2051rsy   -211219TFKVPYSELEE---HHHHbbxbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ec7_A_3091ec7   A     MGMAGNESIUM ION L - 311
1fjs_A_1561fjs   A     GOLGLYCEROL Y - 162
1fjs_A_1561fjs   A     GOLGLYCEROL V - 163
1fjs_A_1561fjs   A     GOLGLYCEROL D - 164
1fjs_A_1561fjs   A     GOLGLYCEROL R - 165
1gs5_A_651gs5   A     NLGN-ACETYL-L-GLUTAMATE L - 65
1gs5_A_651gs5   A     NLGN-ACETYL-L-GLUTAMATE R - 66
1gs5_A_651gs5   A     NLGN-ACETYL-L-GLUTAMATE T - 68
1gs5_A_651gs5   A     NLGN-ACETYL-L-GLUTAMATE I - 76
1gs5_A_651gs5   A     NLGN-ACETYL-L-GLUTAMATE L - 80
1gsi_A_1351gsi   A     MGMAGNESIUM ION S - 150
1gsi_A_1351gsi   A     MGMAGNESIUM ION R - 153
1iex_A_2221iex   A     NAGN-ACETYL-D-GLUCOSAMINE N - 222
1m6i_A_2621m6i   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 262
1oc7_A_981oc7   A     MGMAGNESIUM ION Q - 98
1oc7_A_981oc7   A     ACTACETATE ION Q - 98
1oc7_A_981oc7   A     MGMAGNESIUM ION L - 99
1oc7_A_981oc7   A     ACTACETATE ION L - 99
1oc7_A_981oc7   A     DMFDIMETHYLFORMAMIDE L - 99
1oc7_A_981oc7   A     ACTACETATE ION W - 100
1oc7_A_981oc7   A     DMFDIMETHYLFORMAMIDE W - 100
1oc7_A_981oc7   A     MGMAGNESIUM ION A - 101
1oc7_A_981oc7   A     DMFDIMETHYLFORMAMIDE A - 101
1oc7_A_981oc7   A     DMFDIMETHYLFORMAMIDE N - 102
1oc7_A_981oc7   A     DMFDIMETHYLFORMAMIDE N - 103
1oc7_A_981oc7   A     DMFDIMETHYLFORMAMIDE R - 106
1qwr_A_951qwr   A     ZNZINC ION K - 96
1qwr_A_951qwr   A     ZNZINC ION H - 98
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gs5_A_651gs5   A NLGNLG BINDING SITE FOR CHAIN AR - 66
1gs5_A_651gs5   A NLGNLG BINDING SITE FOR CHAIN AL - 80
1gsi_A_1351gsi   A AC4SO4 BINDING SITE FOR CHAIN AA - 154
1oc7_A_981oc7   A ACTACT BINDING SITE FOR CHAIN AQ - 98
1oc7_A_981oc7   A ACTACT BINDING SITE FOR CHAIN AL - 99
1oc7_A_981oc7   A DMFDMF BINDING SITE FOR CHAIN AW - 100
1oc7_A_981oc7   A DMFDMF BINDING SITE FOR CHAIN AA - 101
1oc7_A_981oc7   A DMFDMF BINDING SITE FOR CHAIN AR - 106

Clusters included in this Subclass
CLUSTER: EH.2.109
CLUSTER: EH.2.90
CLUSTER: EH.3.100
CLUSTER: EH.3.160
CLUSTER: EH.4.294
CLUSTER: EH.4.49