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Information on SUBCLASS 3.26.1
Subclass Accession number: 1228
Subclass: 3.26.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  
GO : GO:0000156 (>75 %)  GO:0003677 (>75 %)  GO:0016614 (>75 %)  GO:0016616 (>75 %)  
SCOP : 51734 (>75 %)  51735 (>75 %)  51830 (>75 %)  52171 (>75 %)  52172 (>75 %)  52173 (>75 %)  52517 (>50 %)  52518 (>50 %)  88749 (>75 %)  
Number of loops: 6

Average sequence ID (%) : 16.7 +/- 15.2
Average RMSD (Å) : 0.933 +/- 0.367

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXXXGXX
(φψ)-conformation: bbpbeaa
Pattern: [FPT][ILVW][AITV]x[ade][gimt][G][cdrs]xx[fhil][pvwy][AGIV]x
Conservation:0.0280.4570.393-0.360-0.295-0.5823.226-0.599-0.168-0.904-0.385-0.443-0.019-0.348
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f32_A_251f32   A2639PWTMLEGDDIQVGKEEEE--GGGHHHHHwabbxbeaaaaaaa
1kek_A_8321kek   A833846FIANATGCSSIWGAEEEE-SSHHHHHHHbbxbxxeaaaaaaa
1ozh_A_3881ozh   A389402TLTVDMGSFHIWIAEEEE-SSHHHHHHHxbbbxbeaaaaaaa
1pbt_A_351pbt   A3649FVVLAGGRTPLPVYEEEE--STTHHHHHbbxbxxeaaaaaaa
1upa_A_4051upa   A405418TIVSDIGFFRHYGVEEEE-SSHHHHHHHbbbbxbeaaaaaaa
1zpd_A_3821zpd   A383396TVIAETGDSWFNAQEEEE-SSHHHHHHHbbxbxpeaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kek_A_8321kek   A     HTL2-ACETYL-THIAMINE DIPHOSPHATE A - 837
1kek_A_8321kek   A     HTL2-ACETYL-THIAMINE DIPHOSPHATE T - 838
1kek_A_8321kek   A     HTL2-ACETYL-THIAMINE DIPHOSPHATE G - 839
1kek_A_8321kek   A     FS4IRON/SULFUR CLUSTER C - 840
1kek_A_8321kek   A     HTL2-ACETYL-THIAMINE DIPHOSPHATE C - 840
1kek_A_8321kek   A     HTL2-ACETYL-THIAMINE DIPHOSPHATE S - 841
1kek_A_8321kek   A     HTL2-ACETYL-THIAMINE DIPHOSPHATE S - 842
1kek_A_8321kek   A     HTL2-ACETYL-THIAMINE DIPHOSPHATE I - 843
1kek_A_8321kek   A     FS4IRON/SULFUR CLUSTER W - 844
1ozh_A_3881ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE D - 393
1ozh_A_3881ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE M - 394
1ozh_A_3881ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE G - 395
1ozh_A_3881ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE S - 396
1ozh_A_3881ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE F - 397
1ozh_A_3881ozh   A     PO4PHOSPHATE ION I - 401
1ozh_A_3881ozh   A     PO4PHOSPHATE ION A - 402
1ozh_A_3881ozh   A     PO4PHOSPHATE ION R - 403
1pbt_A_351pbt   A     MSESELENOMETHIONINE I - 35
1pbt_A_351pbt   A     MSESELENOMETHIONINE V - 37
1pbt_A_351pbt   A     MSESELENOMETHIONINE L - 52
1upa_A_4051upa   A     MSESELENOMETHIONINE T - 405
1upa_A_4051upa   A     MSESELENOMETHIONINE I - 406
1upa_A_4051upa   A     MSESELENOMETHIONINE V - 407
1upa_A_4051upa   A     TPPTHIAMINE DIPHOSPHATE D - 409
1upa_A_4051upa   A     TPPTHIAMINE DIPHOSPHATE I - 410
1upa_A_4051upa   A     TPPTHIAMINE DIPHOSPHATE G - 411
1upa_A_4051upa   A     TPPTHIAMINE DIPHOSPHATE F - 412
1upa_A_4051upa   A     TPPTHIAMINE DIPHOSPHATE F - 413
1upa_A_4051upa   A     TPPTHIAMINE DIPHOSPHATE R - 414
1upa_A_4051upa   A     MSESELENOMETHIONINE L - 419
1zpd_A_3821zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER E - 387
1zpd_A_3821zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER T - 388
1zpd_A_3821zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER G - 389
1zpd_A_3821zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER D - 390
1zpd_A_3821zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER S - 391
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1upa_A_4051upa   A AC1TPP BINDING SITE FOR CHAIN AI - 410
1upa_A_4051upa   A AC1TPP BINDING SITE FOR CHAIN AG - 411
1upa_A_4051upa   A AC3SO4 BINDING SITE FOR CHAIN AR - 414
1upa_A_4051upa   A AC3SO4 BINDING SITE FOR CHAIN AH - 415

Clusters included in this Subclass
CLUSTER: EH.2.146
CLUSTER: EH.4.119