Logo
Information on SUBCLASS 3.28.1
Subclass Accession number: 1230
Subclass: 3.28.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  1 (>75 %)  1.2 (>75 %)  1.2.1 (>75 %)  1.2.1.3 (>75 %)  
GO : GO:0004028 (>75 %)  GO:0016620 (>75 %)  GO:0016829 (>75 %)  GO:0016903 (>75 %)  
SCOP : 52832 (>50 %)  52833 (>50 %)  52901 (>50 %)  53719 (>75 %)  53720 (>75 %)  53721 (>75 %)  
 Number of loops: 2

Average sequence ID (%) : 6.7 +/- 0.0
Average RMSD (Å) : 0.500 +/- 0.000

Consensus geometry
d (Å): 17 delta (°): 0-45 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XpXXXpX
(φψ)-conformation: pbapbaa
Pattern: [TV][IK][LW][L][AN][HQ][GT][FT]x[EY][PT][DQ][IV]x[EW]
Conservation:0.051-1.4820.5621.840-0.7161.073-0.460-0.460-1.227-0.2040.3070.5621.329-1.4820.307
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aco_*_7221aco   -724738TILLNHTFNETQIEWEEEEE----HHHHHHbbbbxbaxbaaaaaa
1gpm_A_3291gpm   A329343VKWLAQGTIYPDVIEEEEEE----HHHHHHxabbxbapbaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpm_A_3291gpm   A     AMPADENOSINE MONOPHOSPHATE A - 333
1gpm_A_3291gpm   A     AMPADENOSINE MONOPHOSPHATE Q - 334
1gpm_A_3291gpm   A     POPPYROPHOSPHATE 2- G - 335
1gpm_A_3291gpm   A     AMPADENOSINE MONOPHOSPHATE G - 335

Clusters included in this Subclass
CLUSTER: EH.5.316