Logo
Information on SUBCLASS 3.29.1
Subclass Accession number: 1232
Subclass: 3.29.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.5 (>50 %)  2.5.1 (>50 %)  2.5.1.92.6 (>75 %)  2.6.1 (>75 %)  2.6.1.1
GO : GO:0004022 (>75 %)  GO:0004069 (>75 %)  GO:0008270 (>75 %)  GO:0008483 (>75 %)  GO:0016614 (>75 %)  GO:0016616 (>75 %)  GO:0016769 (>75 %)  GO:0016829 (>75 %)  GO:0016846 (>75 %)  GO:0016847 (>75 %)  GO:0046914 (>75 %)  
SCOP : 51734 (>75 %)  51735 (>75 %)  51736 (>75 %)  52120 (>50 %)  52121 (>50 %)  52122 (>50 %)  53382 (>75 %)  53383 (>75 %)  53384 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 18.6 +/- 17.5
Average RMSD (Å) : 0.450 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XpPXhXp
(φψ)-conformation: bbwbpaa
Pattern: [AV][ILMY][IV]x[QST][P][GTV][FW]x[EHNS][HY]xxx[CFIL][AIKT]x
Conservation:0.091-0.1490.858-0.960-0.0602.494-0.5351.413-0.690-0.1191.572-0.960-0.780-0.437-0.299-0.750-0.690
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ajs_A_1331ajs   A133149VYVSSPTWENHNGVFTTEEEEES--THHHHHHHHbbbxbwbxaaaaaaaaa
1bw0_A_1301bw0   A131147ALVPQPGFPHYETVCKAEEEEES--THHHHHHHHbxbwbwbxaaaaaaaaa
1lc5_A_1001lc5   A101117AMIVTPGFAEYGRALAQEEEEES--THHHHHHHHbbbbbwbpaaaaaaaaa
1o4s_A_1151o4s   A116132VIVFSPVWVSYIPQIILEEEEES--TTHHHHHHHbxbbxwbxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ajs_A_1331ajs   A     PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID W - 140
1ajs_A_1331ajs   A     PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID E - 141
1ajs_A_1331ajs   A     PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID N - 142
1ajs_A_1331ajs   A     PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID H - 143
1bw0_A_1301bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) F - 138
1bw0_A_1301bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) Y - 141
1lc5_A_1001lc5   A     PIHYDROGENPHOSPHATE ION F - 108
1lc5_A_1001lc5   A     PIHYDROGENPHOSPHATE ION A - 109
1o4s_A_1151o4s   A     PLPPYRIDOXAL-5'-PHOSPHATE W - 123
1o4s_A_1151o4s   A     PLPPYRIDOXAL-5'-PHOSPHATE Y - 126

Clusters included in this Subclass
CLUSTER: EH.5.73