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Information on SUBCLASS 4.11.3
Subclass Accession number: 1256
Subclass: 4.11.3 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0001584 (>75 %)  GO:0001653 (>75 %)  GO:0004872 (>75 %)  GO:0004888 (>75 %)  GO:0004930 (>75 %)  GO:0008528 (>75 %)  GO:0016772 (>75 %)  GO:0042277 (>75 %)  
SCOP : 53821 (>75 %)  53822 (>75 %)  53823 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 9.8 +/- 15.7
Average RMSD (Å) : 0.800 +/- 0.115

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XpXXhXpX
(φψ)-conformation: bbabpbaa
Pattern: x[AMT][NR][PSTV]x[LPV][APS][HNRY]x[AKS][AELM]x[ADE]xx[ALT][AQT]
Conservation:-1.1820.4622.446-0.440-1.347-0.0060.7940.714-0.5230.755-0.770-1.0951.166-1.018-0.3580.1160.286
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a9x_A_2951a9x   A299315EMNPRVSRSSALASKATEEESS--HHHHHHHHHHbbbabxbaaaaaaaaaa
1dp4_A_1231dp4   A123139TTRTGPSHVKLGDFVTAEEE-S--HHHHHHHHHHxbxabxbaaaaaaaaaa
1guq_A_1661guq   A170186WANSFLPNEAEREDRLQEEESS--HHHHHHHHHHbbbabxxaaaaaaaaaa
1jdp_A_1291jdp   A129145LTRVAPAYAKMGEMMLAEEE-S--HHHHHHHHHHbbxabxxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a9x_A_2951a9x   A     ADPADENOSINE-5'-DIPHOSPHATE I - 298
1a9x_A_2951a9x   A     ADPADENOSINE-5'-DIPHOSPHATE E - 299
1a9x_A_2951a9x   A     MNMANGANESE (II) ION E - 299
1a9x_A_2951a9x   A     PO4PHOSPHATE ION E - 299
1a9x_A_2951a9x   A     MNMANGANESE (II) ION M - 300
1a9x_A_2951a9x   A     ADPADENOSINE-5'-DIPHOSPHATE N - 301
1a9x_A_2951a9x   A     MNMANGANESE (II) ION N - 301
1a9x_A_2951a9x   A     PO4PHOSPHATE ION N - 301
1a9x_A_2951a9x   A     ADPADENOSINE-5'-DIPHOSPHATE R - 303
1a9x_A_2951a9x   A     MNMANGANESE (II) ION R - 303
1a9x_A_2951a9x   A     PO4PHOSPHATE ION R - 303
1a9x_A_2951a9x   A     PO4PHOSPHATE ION S - 305
1a9x_A_2951a9x   A     ADPADENOSINE-5'-DIPHOSPHATE R - 306
1a9x_A_2951a9x   A     MNMANGANESE (II) ION R - 306
1a9x_A_2951a9x   A     PO4PHOSPHATE ION R - 306
1a9x_A_2951a9x   A     PO4PHOSPHATE ION S - 307
1guq_A_1661guq   A     GUDGLUCOSE-URIDINE-C1,5'-DIPHOSPHATE G - 166
1guq_A_1661guq   A     GUDGLUCOSE-URIDINE-C1,5'-DIPHOSPHATE G - 167
1guq_A_1661guq   A     GUDGLUCOSE-URIDINE-C1,5'-DIPHOSPHATE Q - 168
1guq_A_1661guq   A     GUDGLUCOSE-URIDINE-C1,5'-DIPHOSPHATE W - 170
1guq_A_1661guq   A     FEFE (III) ION E - 182

Clusters included in this Subclass
CLUSTER: EH.3.259
CLUSTER: EH.5.192