Information on SUBCLASS 2.2.6 |
Subclass Accession number: 126
Subclass: 2.2.6 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 15.2 +/- 15.4 Average RMSD (Å) : 0.600 +/- 0.141 Consensus geometry
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Consensus Sequence: | XXGhpX |
(φψ)-conformation: | aagpbp |
Pattern: | [afgklm] | [aep] | x | [ACFILVY] | [aegkqrs] | [AEKQ] | x | [AEG] | [ACLWY] | [cknrst] | x |
Conservation: | -1.108 | 0.302 | -1.049 | 0.123 | -0.456 | 0.679 | -0.576 | 2.548 | -0.173 | -0.106 | -0.184 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bgx_T_764 | 1bgx | T | 769 | 779 | FPRLEEMGARM | HHHHHHHT-EE | aaaaaaavbbx |
1cli_A_116 | 1cli | A | 127 | 137 | AEGCLQSGCSL | HHHHHHHT-EE | aaaaaaavbbx |
1dcp_A_10 | 1dcp | A | 17 | 27 | LPNLRAVGWNE | HHHHHHHT-EE | aaaaaaagxbx |
1ewk_A_235 | 1ewk | A | 245 | 255 | KELAAQEGLCI | HHHHHHHT-EE | aaaaaaavxxx |
1g2q_A_136 | 1g2q | A | 142 | 152 | GELVEQLEANL | HHHHHHTT-EE | aaaaaaavbbx |
1g3q_A_145 | 1g3q | A | 155 | 165 | GIVLKKAGLAI | HHHHHHTT-EE | aaaaaaagxxx |
1ghe_A_136 | 1ghe | A | 138 | 148 | EAFYSALAYTR | HHHHHHTT-EE | aaaaaaavxxx |
1lh0_A_1132 | 1lh0 | A | 1137 | 1147 | MEIIQAHGATL | HHHHHHTT-EE | aaaaaaavxbx |
1m2x_A_125 | 1m2x | A | 125 | 135 | LEYFGKIGAKT | HHHHHHTT-EE | aaaaaaavxbO |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ewk_A_235 | 1ewk | A | GLUGLUTAMIC ACID | Y - 236 |
1g3q_A_145 | 1g3q | A | ADPADENOSINE-5'-DIPHOSPHATE | N - 171 |
1g3q_A_145 | 1g3q | A | ADPADENOSINE-5'-DIPHOSPHATE | R - 172 |
1g3q_A_145 | 1g3q | A | ADPADENOSINE-5'-DIPHOSPHATE | Y - 173 |
1ghe_A_136 | 1ghe | A | ACOACETYL COENZYME *A | V - 136 |
1ghe_A_136 | 1ghe | A | ACOACETYL COENZYME *A | A - 137 |
1ghe_A_136 | 1ghe | A | ACOACETYL COENZYME *A | A - 139 |
1ghe_A_136 | 1ghe | A | MSESELENOMETHIONINE | F - 140 |
1ghe_A_136 | 1ghe | A | ACOACETYL COENZYME *A | F - 140 |
1ghe_A_136 | 1ghe | A | MSESELENOMETHIONINE | Y - 141 |
1ghe_A_136 | 1ghe | A | ACOACETYL COENZYME *A | Y - 141 |
1ghe_A_136 | 1ghe | A | ACOACETYL COENZYME *A | A - 143 |
1ghe_A_136 | 1ghe | A | MSESELENOMETHIONINE | L - 144 |
1ghe_A_136 | 1ghe | A | ACOACETYL COENZYME *A | L - 144 |
1ghe_A_136 | 1ghe | A | MSESELENOMETHIONINE | Y - 146 |
1ghe_A_136 | 1ghe | A | MSESELENOMETHIONINE | A - 157 |
1lh0_A_1132 | 1lh0 | A | OROOROTIC ACID | L - 1154 |
Clusters included in this Subclass |
CLUSTER: HE.2.30 |