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Information on SUBCLASS 4.12.5
Subclass Accession number: 1269
Subclass: 4.12.5 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 14.8 +/- 15.1
Average RMSD (Å) : 1.033 +/- 0.153

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: YhXXXcXX
(φψ)-conformation: bbppapaa
Pattern: [FIV][Y][IP][LTV]xx[DKN][NPT]xxx[EQS][AT][IV][FV][EKP][LVY][AFL]
Conservation:0.0453.4770.073-0.336-0.641-0.641-0.031-0.412-0.794-0.382-0.9460.0450.2551.1070.417-0.183-0.336-0.717
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hsk_A_481hsk   A5168FYITPTKNEEVQAVVKYAEEE--SSHHHHHHHHHHHbbbbxabaaaaaaaaaaa
1sx5_A_301sx5   A3047IYPLGSDTAVLSTIFELFEEE--SSHHHHHHHHHHHbbxxxaxaaaaaaaaaaa
1v4v_A_2321v4v   A234251VYPVHLNPVVREAVFPVLEEE--S-HHHHHHHHHHHbbxxpapaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1sx5_A_301sx5   A     MNMANGANESE (II) ION D - 36
1sx5_A_301sx5   A     MNMANGANESE (II) ION E - 45
1v4v_A_2321v4v   A     MSESELENOMETHIONINE Y - 235
1v4v_A_2321v4v   A     MSESELENOMETHIONINE P - 236
1v4v_A_2321v4v   A     MSESELENOMETHIONINE V - 237
1v4v_A_2321v4v   A     MSESELENOMETHIONINE H - 238
1v4v_A_2321v4v   A     MSESELENOMETHIONINE V - 243
1v4v_A_2321v4v   A     MSESELENOMETHIONINE V - 247
1v4v_A_2321v4v   A     MSESELENOMETHIONINE L - 251

Clusters included in this Subclass
CLUSTER: EH.5.217