Logo
Information on SUBCLASS 4.13.2
Subclass Accession number: 1272
Subclass: 4.13.2 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.1 (>50 %)  3.1.1 (>50 %)  3.1.1.47
GO : GO:0003847 (>50 %)  GO:0016788 (>50 %)  GO:0016789 (>50 %)  
SCOP : 52171 (>50 %)  52266 (>50 %)  52273 (>50 %)  
 Number of loops: 6

Average sequence ID (%) : 11.9 +/- 14.9
Average RMSD (Å) : 0.833 +/- 0.308

Consensus geometry
d (Å): 15 delta (°): 0-45 theta (°): 0-45 rho (°): 225-270
Consensus Sequence: XhhXhpXX
(φψ)-conformation: bbppppaa
Pattern: x[ilpvw][GPV][degp][AGLPV][DGKRT][aers]xx[atv][agqs][aent][AFIK][akl]
Conservation:-0.149-2.0011.202-0.990-1.0240.144-0.2080.4500.7022.033-0.259-0.264-0.2710.635
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cbf_*_1231cbf   -126139IVPGVTSVFAAAAAEE----HHHHHHHHxbwbxxaaaaaaaa
1ejd_A_2241ejd   A226239YRVLPDRIETGTFLEE--B-HHHHHHHHbbxxxxaaaaaaaa
1fm0_E_1331fm0   E135148RWVEARESDQQAAKEE----HHHHHHHHbxxxxbaaaaaaaa
1g6s_A_2361g6s   A237250YLVEGDASSASYFLEE--B-HHHHHHHHbxxxxxaaaaaaaa
1lt8_A_231lt8   A2336VIGDGGFVFALEKREE----HHHHHHHHxxxbxxaaaaaaaa
1npp_A_1681npp   A168181KPVPLKEEEVQNILEE--B-HHHHHHHHbpxxxxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cbf_*_1231cbf   *     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 130
1cbf_*_1231cbf   *     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 131
1cbf_*_1231cbf   *     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 132
1cbf_*_1231cbf   *     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 133
1cbf_*_1231cbf   *     SAHS-ADENOSYL-L-HOMOCYSTEINE A - 135
1cbf_*_1231cbf   *     SAHS-ADENOSYL-L-HOMOCYSTEINE A - 136
1ejd_A_2241ejd   A     PO4PHOSPHATE ION R - 232
1ejd_A_2241ejd   A     PO4PHOSPHATE ION I - 233
1g6s_A_2361g6s   A     FMTFORMIC ACID T - 236
1g6s_A_2361g6s   A     FMTFORMIC ACID Y - 237
1g6s_A_2361g6s   A     FMTFORMIC ACID L - 238
1g6s_A_2361g6s   A     FMTFORMIC ACID V - 239
1lt8_A_231lt8   A     CBHS-(D-CARBOXYBUTYL)-L-HOMOCYSTEINE D - 26
1lt8_A_231lt8   A     CBHS-(D-CARBOXYBUTYL)-L-HOMOCYSTEINE G - 27
1lt8_A_231lt8   A     CBHS-(D-CARBOXYBUTYL)-L-HOMOCYSTEINE G - 28
1lt8_A_231lt8   A     CBHS-(D-CARBOXYBUTYL)-L-HOMOCYSTEINE F - 29
1lt8_A_231lt8   A     ZNZINC ION V - 30
1lt8_A_231lt8   A     CBHS-(D-CARBOXYBUTYL)-L-HOMOCYSTEINE V - 30
1lt8_A_231lt8   A     ZNZINC ION F - 31
1lt8_A_231lt8   A     CBHS-(D-CARBOXYBUTYL)-L-HOMOCYSTEINE F - 31

Clusters included in this Subclass
CLUSTER: EH.4.235
CLUSTER: EH.5.98