Information on SUBCLASS 4.13.4 |
Subclass Accession number: 1274
Subclass: 4.13.4 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>50 %) 1.11 (>50 %) 1.11.1 (>50 %) 1.11.1.10 GO : GO:0004601 (>75 %) GO:0016684 (>75 %) GO:0016691 (>50 %) SCOP : 53473 (>75 %) 53474 (>75 %) 53531 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 10.0 +/- 11.6 Average RMSD (Å) : 1.175 +/- 0.320 Consensus geometry
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Consensus Sequence: | hhXXXpXX |
(φψ)-conformation: | bbppppaa |
Pattern: | [AGIT] | x | [IV] | x | x | [KP] | x | [DKQT] | [EKP] | [ACK] | [HKMQ] | x | [AEKQ] | x | [CEWY] |
Conservation: | -0.740 | -0.897 | 2.126 | -0.793 | -1.211 | 2.202 | -0.740 | -0.114 | 0.629 | -0.025 | -0.009 | -0.035 | 0.200 | -0.218 | -0.375 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1m2r_A_63 | 1m2r | A | 67 | 81 | IKILKPVKKKKIKRE | EEEE-S--HHHHHHH | bbxxxpbpaaaaaaa |
1mc2_A_1081 | 1mc2 | A | 1081 | 1095 | AIVCGKNQPCMQEMC | EEEE-S--HHHHHHH | bxbxxxbxaaaaaaa |
1me4_A_109 | 1me4 | A | 109 | 123 | GHVELPQDEAQIAAW | EEEE--S-HHHHHHH | ebbbxxxbaaaaaaa |
1st0_A_127 | 1st0 | A | 129 | 143 | TTVVYPATEKHLQKY | EEEESS--HHHHHHH | bbbbbwxxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1m2r_A_63 | 1m2r | A | MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE | I - 66 |
1m2r_A_63 | 1m2r | A | MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE | K - 68 |
1st0_A_127 | 1st0 | A | GTG7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE | K - 128 |
1st0_A_127 | 1st0 | A | GTG7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE | T - 130 |
1st0_A_127 | 1st0 | A | GTG7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE | K - 142 |
1st0_A_127 | 1st0 | A | GTG7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE | Y - 143 |
Clusters included in this Subclass |
CLUSTER: EH.4.170 |