Information on SUBCLASS 5.3.1 |
Subclass Accession number: 134
Subclass: 5.3.1 Type: HE alpha-beta DB: ArchDB-KI |
Number of loops: 4 Average sequence ID (%) : 64.9 +/- 6.2 Average RMSD (Å) : 0.29 +/- 0.07 Consensus geometry
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Consensus Sequence: | pYRPphPII |
(φψ)-conformation: | aalpappbp |
Pattern: | [RT] | [ST] | [AP] | [HR] | x | [V] | x | [KR] | [Y] | [R] | [P] | [NR] | [AC] | [P] | [I] | [I] | [AL] | [V] | [T] |
Conservation: | -1.017 | -0.590 | -0.874 | -0.306 | -1.443 | 0.120 | -0.732 | -0.164 | 1.824 | 0.688 | 1.824 | -0.590 | -0.306 | 1.824 | 0.120 | 0.120 | -1.301 | 0.120 | 0.688 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a3w_A_406 | 1a3w | A | 406 | 424 | TTPRLVSKYRPNCPIILVT | HHHHHHHHT--SS-EEEEE | aaaaaaaaaOxabxbxbxb |
1a3x_A_406 | 1a3x | A | 406 | 424 | TTPRLVSKYRPNCPIILVT | HHHHHHHHT--SS-EEEEE | aaaaaaaaalxabpbxxxb |
1a49_A_435 | 1a49 | A | 435 | 453 | RSAHQVARYRPRAPIIAVT | HHHHHHHHT--SS-EEEEE | aaaaaaaaalxaxxxxxxb |
1pkm_*_435 | 1pkm | - | 435 | 453 | RSAHQVARYRPRAPIIAVT | HHHHHHHHT--SS-EEEEE | aaaaaaaaalxaxxbxbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a3w_A_406 | 1a3w | A | FBPFRUCTOSE-1,6-DIPHOSPHATE | T - 406 |
1a3w_A_406 | 1a3w | A | FBPFRUCTOSE-1,6-DIPHOSPHATE | T - 407 |
1a3w_A_406 | 1a3w | A | FBPFRUCTOSE-1,6-DIPHOSPHATE | P - 408 |
Bibliographic annotations |
Loop | PDB | Chain | Annotation | Residue |
1a3w_A_406 | 1a3w RefM.S.JURICA,A.MESECAR,P.J.HEATH,W.SHI,T.NOWAK,B.L.STODDARD. THE ALLOSTERIC REGULATION OF PYRUVATE KINASE BY FRUCTOSE-1,6-BISPHOSPHATE STRUCTURE (LONDON) v.6;195,1998 | A | FRUCTOSE-DI-P BINDING RESIDUE | T - 407 |
Clusters included in this Subclass |
CLUSTER: HE.5.11 |