Information on SUBCLASS 5.1.3 |
Subclass Accession number: 1361
Subclass: 5.1.3 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>75 %) 1.1.1 (>75 %) 1.1.1.1 (>75 %) 3.1 (>75 %) 3.1.1 (>75 %) 3.1.1.4 GO : GO:0004022 (>50 %) GO:0005509 (>75 %) GO:0008270 (>50 %) GO:0016298 (>75 %) GO:0016614 (>50 %) GO:0016616 (>50 %) GO:0016788 (>75 %) GO:0016789 (>75 %) GO:0046914 (>50 %) SCOP : 48618 (>75 %) 48619 (>75 %) 48623 (>75 %) 50128 (>75 %) 50129 (>75 %) 50136 (>75 %) 51734 (>75 %) 51735 (>75 %) 51736 (>75 %) |
Number of loops: 7 Average sequence ID (%) : 8.8 +/- 12.0 Average RMSD (Å) : 0.886 +/- 0.227 Consensus geometry
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Consensus Sequence: | XhXXpXXpp |
(φψ)-conformation: | bbpaappaa |
Pattern: | x | [lmvy] | x | [cgilmv] | [agqrs] | x | [DEGQRT] | x | [EGPST] | [denqs] | [adekq] | [DEST] | [fgkv] | [aem] | x | [aikltv] | [afl] | [ekrs] | x |
Conservation: | -1.430 | 0.430 | -0.952 | -0.863 | -0.403 | -0.861 | 0.258 | 0.333 | 0.624 | 0.503 | 1.072 | 2.743 | -1.092 | -0.087 | -0.801 | -0.260 | 0.604 | 0.936 | -0.756 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d0n_A_458 | 1d0n | A | 464 | 482 | YNWQGAQSTQDEVAASAIL | EEEE-TTS-HHHHHHHHHH | bbxbxaaxxaaaaaaaaaa |
1d3g_A_251 | 1d3g | A | 253 | 271 | LVKIAPDLTSQDKEDIASV | EEEE-S---HHHHHHHHHH | bbbbxaaxxaaaaaaaaaa |
1jak_A_357 | 1jak | A | 359 | 377 | QYWGLDRTGDAEKAEVAEA | EE---TTS-HHHHHHHHHH | bxaxbaappaaaaaaaaaa |
1kqf_A_161 | 1kqf | A | 162 | 180 | GMLCASGASNETGMLTQKF | EEE--TTS-HHHHHHHHHH | bbbbxaabxaaaaaaaaaa |
1l9x_A_46 | 1l9x | A | 47 | 65 | VVPVRLDLTEKDYEILFKS | EEEE-SS--HHHHHHHHHH | bbwbxaaxxaaaaaaaaaa |
1rkd_*_137 | 1rkd | - | 137 | 155 | ALLMQLESPLESVMAAAKI | EEEE-SSS-HHHHHHHHHH | bbbbbaabpaaaaaaaaaa |
1tig_*_85 | 1tig | - | 87 | 105 | EVRLSPTIEEHDFNTKLRN | EEEE-TT--HHHHHHHHHH | bbxbxaaxxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1rkd_*_137 | 1rkd | * | RB1RESIDUES MAKING DIRECT HYDROGEN BONDS WITH RIBOSE. | E - 143 |
Clusters included in this Subclass |
CLUSTER: EH.4.128 |
CLUSTER: EH.6.98 |