Logo
Information on SUBCLASS 5.1.8
Subclass Accession number: 1366
Subclass: 5.1.8 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 11.1 +/- 14.0
Average RMSD (Å) : 0.750 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XhXhphpXp
(φψ)-conformation: bbpaappaa
Pattern: xxxxx[DHR]x[DT]x[KQS][DEQT][AFIL]
Conservation:-1.000-1.220-0.885-0.9810.4131.289-0.8851.609-0.5950.9350.537-0.216
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f5a_A_1141f5a   A118129CVAPRHVDRSDFEEE-TT--HHHHxbbxaabxaaaa
1omh_A_2191omh   A219229.FDLAHIDRQQI.EEETTS-HHHH.bbxaabxaaaa
1pbj_A_771pbj   A7787.TISPRATIKEA.EE-TTS-HHHH.bxxaaxxaaaa
1s3i_A_1461s3i   A152163CEVLPDDTVSTLEE--TT--HHHHbxxxaapbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f5a_A_1141f5a   A     MNMANGANESE (II) ION I - 114
1f5a_A_1141f5a   A     MNMANGANESE (II) ION D - 115
1f5a_A_1141f5a   A     3AT3'-DEOXYADENOSINE-5'-TRIPHOSPHATE D - 115
1f5a_A_1141f5a   A     3POTRIPHOSPATE D - 115
1pbj_A_771pbj   A     MSESELENOMETHIONINE P - 80
1pbj_A_771pbj   A     MSESELENOMETHIONINE E - 86
1pbj_A_771pbj   A     MSESELENOMETHIONINE A - 87
1pbj_A_771pbj   A     MSESELENOMETHIONINE A - 88
1pbj_A_771pbj   A     MSESELENOMETHIONINE E - 89

Clusters included in this Subclass
CLUSTER: EH.5.248
CLUSTER: EH.6.175