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Information on SUBCLASS 7.1.1
Subclass Accession number: 138
Subclass: 7.1.1
Type: HE alpha-beta
DB: ArchDB-KI
 Number of loops: 6

Average sequence ID (%) : 49.7 +/- 4.2
Average RMSD (Å) : 1.01 +/- 0.45

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXpXXCpNGFh
(φψ)-conformation: aapaaaaaebb
Pattern: [D]x[LMV][TV]x{AGM}[IL]x[DEKR][EK]x[ILT]{ENS}[KNQT]{DP}x[C][KQR][N][G][F][IL][L]{D}
Conservation:1.407-0.715-0.157-0.218-0.934-1.2240.066-0.757-0.5800.178-0.966-0.579-0.799-0.742-0.360-0.8052.749-0.0881.4071.4071.4070.1080.513-0.320
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ak2_*_771ak2   -77100DEMVLELIEKNLETPPCKNGFLLDHHHHHHHHHHHHTSGGGTT-EEEEaaaaaaaaaaaaaxaaaaaebbxb
1ake_A_611ake   A6184DELVIALVKERIAQEDCRNGFLLDHHHHHHHHHHHHHSGGGGG-EEEEaaaaaaaaaaaaaxaaaaaebbxb
1aky_*_651aky   -6689DIMVNMIKDELTNNPACKNGFILDHHHHHHHHHHHHH-GGGGS-EEEEaaaaaaaaaaaaaxaaaaaebbxb
1dvr_A_661dvr   A6689DIMVNMIKDELTNNPACKNGFILVHHHHHHHHHHHHH-GGGGT-EEEEaaaaaaaaaaaaabaaaaaebbxb
1zip_*_611zip   -6184DEVTIGIVRERLSKDDCQNGFLLDHHHHHHHHHHHHTSGGGTT-EEEEaaaaaaaaaaaaaxaaaaaebbxb
2eck_A_612eck   A6184DELVIALVKERIAQEDCRNGFLLDHHHHHHHHHHHHTSGGGGS--EEEaaaaaaaaaaaaapaaaaaebbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ake_A_611ake   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 61
1ake_A_611ake   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE V - 64
1ake_A_611ake   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 84
1aky_*_651aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 65
1aky_*_651aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE M - 68
1aky_*_651aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 89
1aky_*_651aky   *     IMDIMIDAZOLE D - 89
1dvr_A_661dvr   A     ATFPHOSPHODIFLUOROMETHYLPHOSPHONIC ACID-ADENYLATE ESTER V - 89
1zip_*_611zip   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 61
1zip_*_611zip   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE T - 64
1zip_*_611zip   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 84
1zip_*_611zip   *     MNMANGANESE (II) ION D - 84
2eck_A_612eck   A     AMPADENOSINE MONOPHOSPHATE D - 61
2eck_A_612eck   A     AMPADENOSINE MONOPHOSPHATE V - 64
2eck_A_612eck   A     AMPADENOSINE MONOPHOSPHATE D - 84
2eck_A_612eck   A     ADPADENOSINE-5'-DIPHOSPHATE D - 84
Bibliographic annotations
LoopPDBChainAnnotationResidue
1ake_A_611ake   RefC.W.MUELLER,G.E.SCHULZ. STRUCTURE OF THE COMPLEX BETWEEN ADENYLATE KINASE FROM ESCHERICHIA COLI AND THE INHIBITOR AP=5=A REFINED AT 1.9 ANGSTROMS RESOLUTION: A MODEL FOR A CATALYTIC TRANSITION STATE  J.MOL.BIOL. v.224;159,1992AAMP BINDING RESIDUE D - 61
1ake_A_611ake   RefC.W.MUELLER,G.E.SCHULZ. STRUCTURE OF THE COMPLEX BETWEEN ADENYLATE KINASE FROM ESCHERICHIA COLI AND THE INHIBITOR AP=5=A REFINED AT 1.9 ANGSTROMS RESOLUTION: A MODEL FOR A CATALYTIC TRANSITION STATE  J.MOL.BIOL. v.224;159,1992AAMP BINDING RESIDUE D - 61
2eck_A_612eck   RefM.B.BERRY,T.BILDERBACK,M.GLASER,G.N.PHILLIPS JUNIOR. A CRYSTAL STRUCTURE OF E. COLI ADENYLATE KINASE WITH BOUND AMP AND ADP  PROTEINS v.15;276,1998AMg ION BINDING RESIDUED - 84

Clusters included in this Subclass
CLUSTER: HE.8.1
CLUSTER: HE.8.5