Information on SUBCLASS 2.3.6 |
Subclass Accession number: 138
Subclass: 2.3.6 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 48725 (>75 %) 48726 (>75 %) 48942 (>75 %) |
Number of loops: 7 Average sequence ID (%) : 16.7 +/- 15.9 Average RMSD (Å) : 0.614 +/- 0.157 Consensus geometry
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Consensus Sequence: | XphDhh |
(φψ)-conformation: | aapabb |
Pattern: | [AFGIL] | x | x | [FLVY] | [ckrs] | [DHKNY] | [aly] | [DH] | [ailv] | [AILTV] | [GLTV] | [fimtv] |
Conservation: | -0.730 | -0.468 | -0.879 | 0.605 | -0.061 | 0.073 | -0.545 | 2.875 | -0.322 | 0.288 | -0.455 | -0.382 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ax4_A_246 | 1ax4 | A | 251 | 262 | FDMYKYADALTM | HHHGGG-SEEEE | aaaaaababbbb |
1bg6_*_69 | 1bg6 | - | 70 | 81 | GLAVKDADVILI | HHHHTT-SEEEE | aaaaaaxabbbb |
1e79_D_320 | 1e79 | D | 323 | 334 | ATTFAHLDATTV | HHHGGG-SEEEE | aaaaaababbbx |
1moq_*_453 | 1moq | - | 458 | 469 | AEDFSDKHHALF | HHHHTT-SEEEE | aaaaaaxabbbb |
1nwc_A_61 | 1nwc | A | 61 | 72 | IEELKKLDIIVT | HHHHTT-SEEEE | aaaaaaxabbbb |
1rcu_A_90 | 1rcu | A | 91 | 102 | FVLLRNADVVVS | HHHHTT-SEEEE | aaaaaababbbb |
1uqt_A_169 | 1uqt | A | 173 | 184 | LEQLCDYDLLGF | HHHHTTSSEEEE | aaaaaaxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ax4_A_246 | 1ax4 | A | LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) | M - 262 |
1ax4_A_246 | 1ax4 | A | LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) | S - 263 |
1e79_D_320 | 1e79 | D | ATPADENOSINE-5'-TRIPHOSPHATE | F - 326 |
1rcu_A_90 | 1rcu | A | MSESELENOMETHIONINE | S - 90 |
1rcu_A_90 | 1rcu | A | MSESELENOMETHIONINE | F - 91 |
1rcu_A_90 | 1rcu | A | MSESELENOMETHIONINE | V - 92 |
1rcu_A_90 | 1rcu | A | MSESELENOMETHIONINE | L - 93 |
1rcu_A_90 | 1rcu | A | MSESELENOMETHIONINE | R - 95 |
1rcu_A_90 | 1rcu | A | MSESELENOMETHIONINE | D - 98 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ax4_A_246 | 1ax4 | A | LPAPYRIDOXAL 5-PHOSPHATE BINDING SITE. | S - 263 |
Clusters included in this Subclass |
CLUSTER: HE.4.129 |
CLUSTER: HE.4.200 |
CLUSTER: HE.5.72 |
CLUSTER: HE.6.132 |