Information on SUBCLASS 5.5.4 |
Subclass Accession number: 1383
Subclass: 5.5.4 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005525 (>50 %) GO:0019001 (>50 %) SCOP : 52539 (>75 %) 52540 (>75 %) 52592 (>50 %) |
Number of loops: 4 Average sequence ID (%) : 15.5 +/- 16.5 Average RMSD (Å) : 0.825 +/- 0.275 Consensus geometry
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Consensus Sequence: | XXhhchSXp |
(φψ)-conformation: | bbppgppaa |
Pattern: | x | [FGKL] | x | [AFGI] | [APW] | [GN] | x | [ST] | x | [EN] | [QRST] | x | [EKNQ] | x |
Conservation: | -0.367 | -1.340 | 0.121 | -0.981 | -0.230 | 1.934 | -0.501 | 1.393 | -1.084 | 1.514 | -0.112 | -0.327 | 0.502 | -0.521 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b9h_A_292 | 1b9h | A | 294 | 307 | MFRIPGLTEERRNA | EEE-TT--HHHHHH | bbbbpgxxaaaaaa |
1bag_*_11 | 1bag | - | 11 | 24 | ILHAWNWSFNTLKH | EEE-TTB-HHHHHH | bxxxxvxxaaaaaa |
1otg_A_59 | 1otg | A | 66 | 79 | LKIGAGRSLESRQQ | EEE-TT--HHHHHH | bbbxxgxxaaaaaa |
1usp_A_91 | 1usp | A | 99 | 112 | EGHFPGLSREQAEG | EEE-TT--HHHHHH | bxbbpvxxaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1usp_A_91 | 1usp | A | GOLGLYCEROL | F - 92 |
1usp_A_91 | 1usp | A | MSESELENOMETHIONINE | L - 98 |
1usp_A_91 | 1usp | A | MSESELENOMETHIONINE | E - 99 |
1usp_A_91 | 1usp | A | MSESELENOMETHIONINE | G - 100 |
1usp_A_91 | 1usp | A | MSESELENOMETHIONINE | H - 101 |
1usp_A_91 | 1usp | A | MSESELENOMETHIONINE | F - 102 |
1usp_A_91 | 1usp | A | MSESELENOMETHIONINE | Q - 109 |
1usp_A_91 | 1usp | A | MSESELENOMETHIONINE | A - 110 |
1usp_A_91 | 1usp | A | MSESELENOMETHIONINE | E - 111 |
1usp_A_91 | 1usp | A | MSESELENOMETHIONINE | G - 112 |
Clusters included in this Subclass |
CLUSTER: EH.4.272 |
CLUSTER: EH.6.210 |