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Information on SUBCLASS 5.5.4
Subclass Accession number: 1383
Subclass: 5.5.4 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005525 (>50 %)  GO:0019001 (>50 %)  
SCOP : 52539 (>75 %)  52540 (>75 %)  52592 (>50 %)  
Number of loops: 4

Average sequence ID (%) : 15.5 +/- 16.5
Average RMSD (Å) : 0.825 +/- 0.275

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXhhchSXp
(φψ)-conformation: bbppgppaa
Pattern: x[FGKL]x[AFGI][APW][GN]x[ST]x[EN][QRST]x[EKNQ]x
Conservation:-0.367-1.3400.121-0.981-0.2301.934-0.5011.393-1.0841.514-0.112-0.3270.502-0.521
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b9h_A_2921b9h   A294307MFRIPGLTEERRNAEEE-TT--HHHHHHbbbbpgxxaaaaaa
1bag_*_111bag   -1124ILHAWNWSFNTLKHEEE-TTB-HHHHHHbxxxxvxxaaaaaa
1otg_A_591otg   A6679LKIGAGRSLESRQQEEE-TT--HHHHHHbbbxxgxxaaaaaa
1usp_A_911usp   A99112EGHFPGLSREQAEGEEE-TT--HHHHHHbxbbpvxxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1usp_A_911usp   A     GOLGLYCEROL F - 92
1usp_A_911usp   A     MSESELENOMETHIONINE L - 98
1usp_A_911usp   A     MSESELENOMETHIONINE E - 99
1usp_A_911usp   A     MSESELENOMETHIONINE G - 100
1usp_A_911usp   A     MSESELENOMETHIONINE H - 101
1usp_A_911usp   A     MSESELENOMETHIONINE F - 102
1usp_A_911usp   A     MSESELENOMETHIONINE Q - 109
1usp_A_911usp   A     MSESELENOMETHIONINE A - 110
1usp_A_911usp   A     MSESELENOMETHIONINE E - 111
1usp_A_911usp   A     MSESELENOMETHIONINE G - 112

Clusters included in this Subclass
CLUSTER: EH.4.272
CLUSTER: EH.6.210