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Information on SUBCLASS 5.10.1
Subclass Accession number: 1394
Subclass: 5.10.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.2 (>75 %)  1.2.1 (>75 %)  2.7.1 (>75 %)  2.7.1.40
GO : GO:0005529 (>75 %)  GO:0008943 (>75 %)  GO:0016620 (>75 %)  GO:0016903 (>75 %)  GO:0030246 (>75 %)  
SCOP : 51621 (>75 %)  51622 (>75 %)  55346 (>75 %)  55347 (>75 %)  55348 (>75 %)  56435 (>75 %)  56436 (>75 %)  56437 (>75 %)  
Number of loops: 16

Average sequence ID (%) : 24.9 +/- 21.1
Average RMSD (Å) : 0.500 +/- 0.312

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: pLhXhppXX
(φψ)-conformation: bppbbabaa
Pattern: [DEHNQRST][KL][aflmv][astv][FIPV][dehknqrt][DNRST][aegkqrst][ADEGKNS][de]x[adeknqr][afly][ILV][aknqs][cdehkqrs][hilvy]
Conservation:0.1992.1120.001-0.1810.445-0.3430.542-1.201-0.1821.229-1.036-0.908-0.5602.003-0.890-0.839-0.392
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dv8_A_1871dv8   A187203HLVVVTSWEEQKFVQHHEE----SHHHHHHHHHHbppbxabaaaaaaaaaa
1e87_A_1191e87   A119135TLAVIDSEKDMNFLKRYEE----SHHHHHHHHHHbppxbabaaaaaaaaaa
1egi_A_6681egi   A668684DLASINNKEEQQTIWRLEE----SHHHHHHHHHHbxpbbabaaaaaaaaaa
1g1t_A_251g1t   A2541HLVAIQNKEEIEYLNSIEE----SHHHHHHHHHHbxpbbabaaaaaaaaaa
1gz2_A_401gz2   A4157HLAAVRSAAELRLLAELEE----SHHHHHHHHHHbxpxbabaaaaaaaaaa
1h8u_A_271h8u   A2743NLVSIHNFNINYRIQCSEE----SHHHHHHHHHHbpxbbabaaaaaaaaaa
1im8_A_1581im8   A163179EKFRFEDTKINHLLIDLEE---SSHHHHHHHHHHbxbbbaxaaaaaaaaaa
1j34_A_381j34   A3854HLVSIESAGEADFVAQLEE----SHHHHHHHHHHbxpbxabaaaaaaaaaa
1jwi_B_401jwi   B4056HLMSVNSREEGEFISKLEE----SHHHHHHHHHHbxpbbabaaaaaaaaaa
1jzn_A_381jzn   A3955HLASFHRYGESLEIAEYEE----SHHHHHHHHHHbxxbbabaaaaaaaaaa
1k9j_A_3021k9j   A302318QLVVIKTAEEQNFLQLQEE-----HHHHHHHHHHbppbxabaaaaaaaaaa
1pwb_A_2671pwb   A267283QLASPRSAAENAALQQLEE----SHHHHHHHHHHbxpbwabaaaaaaaaaa
1qdd_A_491qdd   A4965NLVSVLTQAEGAFVASLEE----SHHHHHHHHHHbppbbabaaaaaaaaaa
1qo3_C_1731qo3   C173189SLLKIDDEDELKFLQLVEE----SHHHHHHHHHHbppbxabaaaaaaaaaa
1tn3_*_831tn3   -8399TLSTPQTGSENDALYEYEE----SHHHHHHHHHHbxpbwabaaaaaaaaaa
1ukm_B_371ukm   B3753RLASIHSSEEEAFVSKLEE----SHHHHHHHHHHbpxxbabaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dv8_A_1871dv8   A     CACALCIUM ION H - 187
1dv8_A_1871dv8   A     CACALCIUM ION V - 189
1dv8_A_1871dv8   A     CACALCIUM ION V - 190
1dv8_A_1871dv8   A     CACALCIUM ION V - 191
1dv8_A_1871dv8   A     CACALCIUM ION T - 192
1dv8_A_1871dv8   A     CACALCIUM ION E - 196
1gz2_A_401gz2   A     SEPPHOSPHOSERINE A - 55
1gz2_A_401gz2   A     SEPPHOSPHOSERINE E - 56
1gz2_A_401gz2   A     SEPPHOSPHOSERINE L - 57
1gz2_A_401gz2   A     SEPPHOSPHOSERINE N - 59
1h8u_A_271h8u   A     GOLGLYCEROL F - 34
1im8_A_1581im8   A     MSESELENOMETHIONINE V - 158
1im8_A_1581im8   A     MSESELENOMETHIONINE L - 159
1im8_A_1581im8   A     MSESELENOMETHIONINE V - 160
1im8_A_1581im8   A     MSESELENOMETHIONINE L - 161
1im8_A_1581im8   A     MSESELENOMETHIONINE S - 162
1im8_A_1581im8   A     MSESELENOMETHIONINE E - 163
1im8_A_1581im8   A     MSESELENOMETHIONINE K - 164
1im8_A_1581im8   A     MSESELENOMETHIONINE F - 165
1j34_A_381j34   A     CACALCIUM ION V - 40
1j34_A_381j34   A     CACALCIUM ION S - 41
1j34_A_381j34   A     CACALCIUM ION I - 42
1j34_A_381j34   A     CACALCIUM ION E - 43
1j34_A_381j34   A     CACALCIUM ION E - 47
1k9j_A_3021k9j   A     NAGN-ACETYL-D-GLUCOSAMINE T - 319
1k9j_A_3021k9j   A     NAGN-ACETYL-D-GLUCOSAMINE S - 320
1k9j_A_3021k9j   A     NAGN-ACETYL-D-GLUCOSAMINE R - 321
1k9j_A_3021k9j   A     NAGN-ACETYL-D-GLUCOSAMINE S - 322

Clusters included in this Subclass
CLUSTER: EH.5.11