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Information on SUBCLASS 5.12.1
Subclass Accession number: 1397
Subclass: 5.12.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.4 (>75 %)  3.4.22 (>75 %)  
GO : GO:0004175 (>75 %)  GO:0004197 (>75 %)  GO:0008233 (>75 %)  GO:0008234 (>75 %)  GO:0016829 (>75 %)  
SCOP : 54000 (>75 %)  54001 (>75 %)  54002 (>75 %)  
 Number of loops: 7

Average sequence ID (%) : 13.0 +/- 15.4
Average RMSD (Å) : 1.143 +/- 0.315

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XhXpXhXXp
(φψ)-conformation: bbabpbpaa
Pattern: [adrt][FILVY]x[AFIV][gktv][ALWY][aekr][DHKRS][DEKNP][FLTV][ADEPT]x[DEKNST][dety][ailv][aekn][AEGQS][cfilv]
Conservation:-1.6101.221-0.8881.498-0.5110.0930.7080.0890.7291.0900.195-1.9690.611-0.9770.619-1.1190.599-0.380
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b7g_O_2191b7g   O222239FINITLKDKVEKKDILSVEEEEEESS---HHHHHHHbbbbbxabxbbaaaaaaa
1ii7_A_3011ii7   A303320RLNIGWRKPFDLTEIKELEEEEEESS----HHHHHHbbbbxbabwbxaaaaaaa
1ksk_A_1301ksk   A131148TYLVTLESPVADDTAEQFEEEEEESS---TTHHHHHbbbbbbabppxaaaaaaa
1nwc_A_2761nwc   A280297AFTIKLKKDLPLEEIEQIEEEEEESS---HHHHHHHxbbbxxabxbxaaaaaaa
1obf_O_2421obf   O245262DLSFVAKRNTTVEEVNGIEEEEEESS---HHHHHHHbbbbxxabxbbaaaaaaa
1rdr_*_3291rdr   -329346DVIASYPHEVDASLLAQSEEEEEESS---HHHHHHHxbbbbbabpbxaaaaaaa
1vio_A_1301vio   A131148TYLVTLADPVEENYSAACEEEEEESS---TTHHHHHbbxbbbabpxbaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ksk_A_1301ksk   A     URAURACIL K - 130
1ksk_A_1301ksk   A     URAURACIL Y - 132
1ksk_A_1301ksk   A     MSESELENOMETHIONINE F - 148
1obf_O_2421obf   O     CSWCYSTEINE-S-DIOXIDE S - 242
1rdr_*_3291rdr   *     CACALCIUM ION D - 329
1rdr_*_3291rdr   *     CACALCIUM ION V - 330
1vio_A_1301vio   A     BU11,4-BUTANEDIOL Y - 132
1vio_A_1301vio   A     BU11,4-BUTANEDIOL L - 133
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1b7g_O_2191b7g   O CTOCATALYTIC SITE IN SUBUNIT OH - 219

Clusters included in this Subclass
CLUSTER: EH.4.290
CLUSTER: EH.5.202
CLUSTER: EH.6.60