| Information on SUBCLASS 5.16.3 |
|
Subclass Accession number: 1406
Subclass: 5.16.3
Type: EH beta-alpha DB: ArchDB40 Image coordinates: ![]() Consensus coordinates:
|
Number of loops: 3 Average sequence ID (%) : 6.2 +/- 6.8 Average RMSD (Å) : 1.133 +/- 0.208 Consensus geometry
|
| Consensus Sequence: | XpXhXXXXh |
| (φψ)-conformation: | bbpbpppaa |
| Pattern: | x | [MTV] | [NQT] | [AQT] | [ILM] | [DP] | x | [DP] | x | [AGV] | [CSV] | [HRT] | x | [APQ] | x | [RS] |
| Conservation: | -1.365 | 0.129 | 0.129 | -0.415 | 1.351 | 1.887 | -0.822 | 1.887 | -0.279 | -0.686 | -0.550 | -0.143 | -0.686 | -0.415 | -0.958 | 0.935 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1a1v_A_445 | 1a1v | A | 447 | 462 | ETTTLPQDAVSRTQRR | EEE----BHHHHHHHH | bbbxbxxbaaaaaaaa |
| 1bou_B_118 | 1bou | B | 119 | 134 | IMNQMDVDHGCTVPLS | EESS--B-HHHHHHHH | xbabbxbxaaaaaaaa |
| 1o9p_A_256 | 1o9p | A | 256 | 271 | SVQAIDLPEAVHEAWR | EEEE----HHHHHHHH | bbbxbxxwaaaaaaaa |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | T - 449 |
| 1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | T - 450 |
| 1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | L - 451 |
| 1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | P - 452 |
| 1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | Q - 453 |
| 1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | D - 454 |
| 1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | S - 457 |
| 1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | R - 461 |
| 1bou_B_118 | 1bou | B | FEFE (III) ION | H - 127 |
| 1bou_B_118 | 1bou | B | FEFE (III) ION | G - 128 |
| 1o9p_A_256 | 1o9p | A | MLAMALONIC ACID | H - 273 |
| 1o9p_A_256 | 1o9p | A | MLAMALONIC ACID | Q - 277 |
| PDB Site Annotated loops in this subclass |
| Loop | PDB | Chain | Site | Residue |
| 1o9p_A_256 | 1o9p | A | AC1MLA BINDING SITE FOR CHAIN A | Q - 277 |
| Clusters included in this Subclass |
| CLUSTER: EH.5.280 |