Information on SUBCLASS 5.24.1 |
Subclass Accession number: 1418
Subclass: 5.24.1 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 4.4 (>50 %) 4.4 (>75 %) 4.4.1 (>50 %) 4.4.1 (>75 %) GO : GO:0003779 (>75 %) GO:0005509 (>75 %) GO:0005515 (>75 %) GO:0008092 (>75 %) GO:0016829 (>75 %) GO:0016846 (>50 %) GO:0016846 (>75 %) SCOP : 53382 (>50 %) 53382 (>75 %) 53383 (>50 %) 53383 (>75 %) 53402 (>50 %) 53402 (>75 %) 55752 (>75 %) 55753 (>75 %) 55754 (>75 %) |
Number of loops: 6 Average sequence ID (%) : 27.8 +/- 30.7 Average RMSD (Å) : 0.867 +/- 0.344 Consensus geometry
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Consensus Sequence: | hSXhXpphp |
(φψ)-conformation: | bbppappaa |
Pattern: | [GIKLV] | [rs] | [CGIL] | [HS] | [AIPTV] | [GPT] | [gil] | [DEY] | [DST] | [givw] | [DE] | [dq] | [lm] | [ily] | [ads] | [DSV] | [AFLV] | [dekq] |
Conservation: | -0.958 | -0.458 | -0.733 | 1.525 | -0.319 | 0.155 | -0.927 | 0.705 | 0.948 | -1.490 | 2.733 | 0.398 | -0.144 | -0.679 | -0.497 | 0.021 | -0.065 | -0.215 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cl1_A_370 | 1cl1 | A | 371 | 388 | IRLHIGLEDVDDLIADLD | EEEE--SS-HHHHHHHHH | bbbbxxaxxaaaaaaaaa |
1cs1_A_359 | 1cs1 | A | 360 | 377 | LRISTGIEDGEDLIADLE | EEEE--SS-HHHHHHHHH | bbbbxxaxxaaaaaaaaa |
1gc0_A_373 | 1gc0 | A | 374 | 391 | VRLSVGLEDIDDLLADVQ | EEEE--SS-HHHHHHHHH | bbbbxxaxxaaaaaaaaa |
1ibj_A_439 | 1ibj | A | 439 | 456 | VRISAGIEDVDDLISDLD | EEEE--SS-HHHHHHHHH | bbbbxbaxxaaaaaaaaa |
1m4j_A_37 | 1m4j | A | 40 | 57 | GSCSPPSDSWEQDYDSFV | EEEE---S-HHHHHHHHH | abbbwxabxaaaaaaaaa |
1rql_A_121 | 1rql | A | 121 | 138 | KIGSTTGYTREMMDIVAK | EEEE--SS-HHHHHHHHH | xbbbbbaxxaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cl1_A_370 | 1cl1 | A | LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) | R - 372 |
1cl1_A_370 | 1cl1 | A | BCTBICARBONATE ION | R - 372 |
1ibj_A_439 | 1ibj | A | CO3CARBONATE ION | R - 440 |
Clusters included in this Subclass |
CLUSTER: EH.4.95 |