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Information on SUBCLASS 5.56.1
Subclass Accession number: 1451
Subclass: 5.56.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.12 (>75 %)  2.7.1 (>75 %)  2.7.1.40
GO : GO:0000287 (>50 %)  GO:0003954 (>75 %)  GO:0004743 (>50 %)  GO:0005386 (>75 %)  GO:0005489 (>75 %)  GO:0005506 (>75 %)  GO:0008137 (>75 %)  GO:0008324 (>75 %)  GO:0008901 (>75 %)  GO:0015075 (>75 %)  GO:0015077 (>75 %)  GO:0015078 (>75 %)  GO:0015081 (>75 %)  GO:0015399 (>75 %)  GO:0016301 (>50 %)  GO:0016651 (>75 %)  GO:0016655 (>75 %)  GO:0016695 (>75 %)  GO:0016699 (>75 %)  GO:0016772 (>50 %)  GO:0016773 (>50 %)  GO:0046873 (>75 %)  GO:0046914 (>75 %)  GO:0050136 (>75 %)  
SCOP : 51621 (>75 %)  51622 (>75 %)  56769 (>75 %)  56770 (>75 %)  56771 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 10.0 +/- 10.0
Average RMSD (Å) : 1.000 +/- 0.173

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hXXXhXXhp
(φψ)-conformation: bbapgppaa
Pattern: [CLM][LT][IKL][LMV][DV]x[CK][GLY]x[PS][AGI][KS][DES]xxx[GLV][MY][DPS][HQY]
Conservation:0.6770.544-0.6051.0270.398-1.1870.544-1.304-1.0710.786-0.9541.0140.794-1.071-0.488-1.071-1.1871.9170.0941.143
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aua_*_1731aua   -174193CTIMDLKGISISSAYSVMSYEEEEE-TT--HHHHHHHHHHbbbbbapgxbaaaaaaaaaa
1ct5_A_431ct5   A4362LLLVVSKLKPASDIQILYDHEEEEE-TTS-HHHHHHHHHHxxxxxapvxxaaaaaaaaaa
1ktb_A_1361ktb   A136155MLKLDGCYSSGKEQAQGYPQEEEEE-TT--HHHHHHHHHHbbbbxaxlbxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE S - 173
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE T - 175
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE M - 177
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE L - 179
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE I - 182
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE V - 194
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE A - 197
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE S - 198
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE Y - 199
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE I - 200
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE S - 201
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE Q - 202
1aua_*_1731aua   *     BOGB-OCTYLGLUCOSIDE N - 203
1ct5_A_431ct5   A     PLPPYRIDOXAL-5'-PHOSPHATE V - 47
1ct5_A_431ct5   A     PLPPYRIDOXAL-5'-PHOSPHATE K - 49
1ktb_A_1361ktb   A     CRYPROPANE-1,2,3-TRIOL K - 138
1ktb_A_1361ktb   A     CRYPROPANE-1,2,3-TRIOL D - 140
1ktb_A_1361ktb   A     CRYPROPANE-1,2,3-TRIOL C - 142
1ktb_A_1361ktb   A     NAGN-ACETYL-D-GLUCOSAMINE L - 160
1ktb_A_1361ktb   A     NAGN-ACETYL-D-GLUCOSAMINE N - 161
1ktb_A_1361ktb   A     NAGN-ACETYL-D-GLUCOSAMINE A - 162
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ct5_A_431ct5   A SITRESIDUES INTERACTING WITH THE CO-FACTOR PLPK - 49

Clusters included in this Subclass
CLUSTER: EH.4.236