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Information on SUBCLASS 7.25.1
Subclass Accession number: 1536
Subclass: 7.25.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.6 (>50 %)  1.6.99 (>50 %)  1.6.99.26.1 (>75 %)  6.1.1 (>75 %)  
GO : GO:0003955 (>75 %)  GO:0004812 (>75 %)  GO:0005489 (>50 %)  GO:0005524 (>75 %)  GO:0008452 (>75 %)  GO:0016651 (>75 %)  GO:0016874 (>75 %)  GO:0016875 (>75 %)  GO:0016876 (>75 %)  GO:0016886 (>75 %)  
SCOP : 52171 (>75 %)  52218 (>75 %)  52235 (>75 %)  52373 (>75 %)  52374 (>75 %)  52375 (>75 %)  75216 (>50 %)  75217 (>50 %)  82371 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 35.6 +/- 16.3
Average RMSD (Å) : 0.833 +/- 0.321

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hhhGXpGLpXX
(φψ)-conformation: bbppaaebpaa
Pattern: [LV][IM][GL][G][GPS][EN][G][L][HST][EKP][ADG][CV][KL][AQ][AER]
Conservation:0.0460.147-0.8672.118-0.7680.2992.1180.910-0.634-0.500-0.836-0.067-0.725-0.406-0.836
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jo0_A_231jo0   A2337VMLGGNGLTEGVLAEEEE-TT-S-HHHHHHbbxbaaexxaaaaaa
1ns5_A_981ns5   A101115LIGGPEGLSPACKAAEE-BTTB--HHHHHHbbxxaaebxaaaaaa
1vh0_A_1021vh0   A106120VIGGSNGLHKDVLQREE-BTTB--HHHHHHbbxxaaebxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jo0_A_231jo0   A     GOLGLYCEROL M - 24
1jo0_A_231jo0   A     GOLGLYCEROL H - 44
1jo0_A_231jo0   A     GOLGLYCEROL H - 45
1ns5_A_981ns5   A     MSESELENOMETHIONINE V - 98
1ns5_A_981ns5   A     MSESELENOMETHIONINE L - 101
1ns5_A_981ns5   A     MSESELENOMETHIONINE I - 102
1ns5_A_981ns5   A     MSESELENOMETHIONINE G - 103
1ns5_A_981ns5   A     MSESELENOMETHIONINE G - 107
1ns5_A_981ns5   A     MSESELENOMETHIONINE L - 108
1ns5_A_981ns5   A     MSESELENOMETHIONINE C - 112

Clusters included in this Subclass
CLUSTER: EH.6.207